Miyakogusa Predicted Gene
- Lj5g3v0471500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0471500.1 Non Chatacterized Hit- tr|I1M9B2|I1M9B2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23573
PE,71.49,0,UCH_2_1,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2, conserved site; SUBFAMILY NOT NAMED,,CUFF.53050.1
(2160 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70768 similar to UniRef100_A7QJQ5 Cluster: Chromosome... 1074 0.0
gnl|LJGI|BP042370 355 7e-97
gnl|LJGI|TC63226 similar to UniRef100_A7QJQ5 Cluster: Chromosome... 339 4e-92
>gnl|LJGI|TC70768 similar to UniRef100_A7QJQ5 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 679
Score = 1074 bits (542), Expect = 0.0
Identities = 557/562 (99%)
Strand = Plus / Plus
Query: 1 atgcttgttgtggccagtgtatcgtgggatctgaattggttcctgcaattgatactgtac 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 118 atgcttgttgtggccagtgtatcgtgggatctgaatcggttcctgcaattgatactgtac 177
Query: 61 gctcttgttatctgcgttggattgcacgttttggtcaagaacactgcttccaagtacttt 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gctcttgttatctgcgtgggattgcacgttttggtcaagaacactgcttccaagtacttt 237
Query: 121 gaaggcgaacaccactctccctccgcctcaatgcccggcgttcttgccgccgataacgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gaaggcgaacaccactctccctccgcctcaatgcccggcgttcttgccgccgataacgct 297
Query: 181 gtctgcaccgtctgctccgcccacgccacccggagatgctcccgctgcaaagccgtccga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtctgcaccgtctgctccgcccacgccacccggagatgctcccgctgcaaagccgtccga 357
Query: 241 tactgctcaacggaatgccaacagtcgcattggaagtctgggcataatgtaaaatgcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tactgctcaacggaatgccaacagtcgcattggaagtctgggcataatgtaaaatgcaaa 417
Query: 301 tattctcaagaagctactggtgctttgaactcggctcaaaatggggttactaatcgcggc 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 418 tattctcaagaagctactggtgcttagaactcggctcaaaatggggttactaatcgcggc 477
Query: 361 gggtttaaggcttccaggggtaaaagatcgggaatcgcattggtacctggttttggaact 420
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 478 gggtttaaggcttccagaggtaaaagatcgggaatcgcatcggtacctggttttggaact 537
Query: 421 tctagctccaggccaatcaagcagcctaaagatgctctttttccttacaaagaatttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tctagctccaggccaatcaagcagcctaaagatgctctttttccttacaaagaatttgtg 597
Query: 481 aaattttttaattgggacaagccaggatttcccccttgtggactcttgaattgtggaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aaattttttaattgggacaagccaggatttcccccttgtggactcttgaattgtggaaac 657
Query: 541 agttgctttgcaaatgtggttc 562
||||||||||||||||||||||
Sbjct: 658 agttgctttgcaaatgtggttc 679
>gnl|LJGI|BP042370
Length = 526
Score = 355 bits (179), Expect = 7e-97
Identities = 181/182 (99%)
Strand = Plus / Minus
Query: 1693 actaacactattaatattaagtcagctgacactgcaaatgagatttcttgtagtgctgtt 1752
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 526 actaacactattaatattaagtcagctgacactgcnaatgagatttcttgtagtgctgtt 467
Query: 1753 gaatcgtcttatatgcctatttttcaaattgtccaagatttgggggatgtagatatgggg 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaatcgtcttatatgcctatttttcaaattgtccaagatttgggggatgtagatatgggg 407
Query: 1813 agatctttagaagagacttcaggcggcacacaagaggaagatgatgctgctatggctagg 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agatctttagaagagacttcaggcggcacacaagaggaagatgatgctgctatggctagg 347
Query: 1873 tc 1874
||
Sbjct: 346 tc 345
Score = 345 bits (174), Expect = 7e-94
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 1987 aggtcattaactgctacggataatgcatataatggcactggacatgtcagtgaaaataaa 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aggtcattaactgctacggataatgcatataatggcactggacatgtcagtgaaaataaa 290
Query: 2047 tcagctattccacttgaagagtctggtacactaatttcgagttttggttcttttctcact 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcagctattccacttgaagagtctggtacactaatttcgagttttggttcttttctcact 230
Query: 2107 gaaagtgacaaaggaaatggaattaataaagtggaaatatcggcagacaagtaa 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaaagtgacaaaggaaatggaattaataaagtggaaatatcggcagacaagtaa 176
>gnl|LJGI|TC63226 similar to UniRef100_A7QJQ5 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(37%)
Length = 1006
Score = 339 bits (171), Expect = 4e-92
Identities = 297/339 (87%)
Strand = Plus / Plus
Query: 429 caggccaatcaagcagcctaaagatgctctttttccttacaaagaatttgtgaaattttt 488
|||||| ||||||||||||||| || |||| |||||||| | || ||||| ||||| ||
Sbjct: 668 caggcctatcaagcagcctaaaaatcctctctttccttatgatgagtttgtcaaattgtt 727
Query: 489 taattgggacaagccaggatttcccccttgtggactcttgaattgtggaaacagttgctt 548
||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct: 728 taactgggacaagccaggatttcctccctgtggactcttgaattgtggaaacagctgctt 787
Query: 549 tgcaaatgtggttctccagtgtctctcattcacaaggccacttattgcctacttgttgga 608
||| |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 788 tgcgaatgtggttctccaatgtctttcattcacaaagccacttattgcctacttgttgga 847
Query: 609 gaagggccaccgaagagaatgcagttgtaatgattggtgctttctatgtgaatttgaaag 668
|||||| ||||| | ||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 848 gaagggtcaccgcaaagaatgcggccataatgattggtgctttctatgtgaatttgaaat 907
Query: 669 tcacgttgaaagaaccaggcaaagttcacaggcattttctccaatgaatattctctctcg 728
|| |||||||| | |||| ||||||||| || |||||||| ||||||||||| |||||
Sbjct: 908 ccatgttgaaagggcaaggctaagttcacaagcgttttctcctatgaatattctgtctcg 967
Query: 729 tttgcctaatattggtggtactctgggttatggaagaca 767
||||||||||||| ||||| |||| || |||||||||
Sbjct: 968 tttgcctaatatttcgggtacactggattgtggaagaca 1006
Score = 56.0 bits (28), Expect = 1e-06
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 217 tgctcccgctgcaaagccgtccgatactgctcaacggaatgccaacagtcgcattggaag 276
||||| ||||||||| |||| |||||||||||| | ||||||||||| |||||||||
Sbjct: 480 tgctctcgctgcaaatccgttcgatactgctcagaagcatgccaacagttgcattggaaa 539
Query: 277 tctg 280
||||
Sbjct: 540 tctg 543