Miyakogusa Predicted Gene

Lj5g3v0471340.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0471340.2 tr|I0Z139|I0Z139_9CHLO DUF1350-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,38.84,0.0000000000004,DUF1350,Protein of unknown function
DUF1350,CUFF.53081.2
         (1230 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70807 similar to UniRef100_A7P4W8 Cluster: Chromosome...   884   0.0  
gnl|LJGI|TC75501 weakly similar to UniRef100_A9T0P4 Cluster: Pre...   789   0.0  

>gnl|LJGI|TC70807 similar to UniRef100_A7P4W8 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 551

 Score =  884 bits (446), Expect = 0.0
 Identities = 461/466 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaatggcaacctcttccttcatcctaggttcaaatttcaagtgcatgttctcttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  atggaaatggcaacctcttccttcatcctaggttcaaatttcaagtgcatgttctcttcg 145

                                                                       
Query: 61  aagaatactaaaattctgtctggttttggtggattcaaacacccatacccacatgggtta 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 146 aagaatactaaaattctgtctggtttgggtggattcaaacacccatacccacatgggtta 205

                                                                       
Query: 121 ttcagcaaaagcttccatttttacacactgtctcctagaatggtggcagggagaacaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttcagcaaaagcttccatttttacacactgtctcctagaatggtggcagggagaacaaag 265

                                                                       
Query: 181 atggtttctaatgtgtatgttggcagggacacaagtatcagaatcagtagcaagatgttc 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atggtttctaatgtgtatgtgggcagggacacaagtatcagaatcagtagcaagatgttc 325

                                                                       
Query: 241 accgaattggattcttgtctggtgataccacctacaccctatcgtgccaagccaagggct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 accgaattggattcttgtctggtgataccacctacaccctatcgtgccaagccaagggct 385

                                                                       
Query: 301 atagtcaaattcctcggtggtgccttcattggtgctgttcctgaagttacctatgggtac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atagtcaaattcctcggtggtgccttcattggtgctgttcctgaagttacctatgggtac 445

                                                                       
Query: 361 ctaatagagtgtttggcaaaggaaggttttcttgttgtggtggtgccttacaatgtgaca 420
           ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 ctaatagagtgtcaggcaaaggaaggttttcttgtggtggtggtgccttacaatgtgaca 505

                                                         
Query: 421 tttgaccatgctcaagctgctaaacaagtgtatgagaagtttcaca 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttgaccatgctcaagctgctaaacaagtgtatgagaagtttcaca 551


>gnl|LJGI|TC75501 weakly similar to UniRef100_A9T0P4 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (34%)
          Length = 759

 Score =  789 bits (398), Expect = 0.0
 Identities = 398/398 (100%)
 Strand = Plus / Plus

                                                                        
Query: 833  taactaaatttgttgatcagttaccatcagtaatgaatgagattacacaaggagtatccg 892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    taactaaatttgttgatcagttaccatcagtaatgaatgagattacacaaggagtatccg 60

                                                                        
Query: 893  agttcaagccaacaccatctgagaaccgtgattgcttcaaatgttcatacaatgttgaaa 952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agttcaagccaacaccatctgagaaccgtgattgcttcaaatgttcatacaatgttgaaa 120

                                                                        
Query: 953  atacattattggtgaaattcaattctgacgcaattgatgagacagacattcttgaagaaa 1012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atacattattggtgaaattcaattctgacgcaattgatgagacagacattcttgaagaaa 180

                                                                        
Query: 1013 cacttaaacctcgtgtggagtcttttggtgggacattggaaaaagtactacttaatggta 1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cacttaaacctcgtgtggagtcttttggtgggacattggaaaaagtactacttaatggta 240

                                                                        
Query: 1073 accacattacagcttgcattcaggaaccaagatggcaagtgggtaaattgtatactccag 1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  accacattacagcttgcattcaggaaccaagatggcaagtgggtaaattgtatactccag 300

                                                                        
Query: 1133 cagatgctgttgctcaagtgcttaaatctctttctttgagtgatactagaatccttgcca 1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  cagatgctgttgctcaagtgcttaaatctctttctttgagtgatactagaatccttgcca 360

                                                  
Query: 1193 gaaccattagcgactggttcagacgttttgaagattga 1230
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gaaccattagcgactggttcagacgttttgaagattga 398