Miyakogusa Predicted Gene

Lj5g3v0470310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0470310.1 tr|B9HA04|B9HA04_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_762810 PE=4
SV=1,36.17,2e-18,zf-RVT,Reverse transcriptase zinc-binding
domain,CUFF.53031.1
         (523 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777945                                                      70   1e-11

>gnl|LJGI|AV777945 
          Length = 279

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 73  cagactaaagatgaactgaggaaaaggaatgcgattccaagcggaactgat 123
           ||||| |||||||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 226 cagacgaaagatgaactgagaaaaaggaatgtgattccaagtggaactgat 276