Miyakogusa Predicted Gene

Lj5g3v0467080.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0467080.1 tr|G7J8B5|G7J8B5_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_3g104660 PE=4
S,79.21,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PROTEIN_KINASE_ST,Serine/threonine-protein kinase, ,CUFF.53020.1
         (618 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80720 similar to UniRef100_A7P6N6 Cluster: Chromosome...    52   4e-06

>gnl|LJGI|TC80720 similar to UniRef100_A7P6N6 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 853

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 514 tgtgctgaacttagcaagaaggataggccagatcttgcatcagttattgtgccagagctt 573
           ||||| ||||| || |||||||| |||||  |||| ||| ||||| || |||||||||||
Sbjct: 5   tgtgcagaactcagtaagaaggacaggccgaatctcgcaacagttgttttgccagagctt 64

                         
Query: 574 aatcgtttaagaga 587
           || || ||||||||
Sbjct: 65  aaccgattaagaga 78