Miyakogusa Predicted Gene
- Lj5g3v0444870.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0444870.4 Non Chatacterized Hit- tr|A3ALV9|A3ALV9_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,78.12,0.000001,Oxysterol_BP,Oxysterol-binding protein; seg,NULL;
Oxysterol-binding protein-like,NULL; coiled-coil,N,CUFF.53079.4
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65244 similar to UniRef100_A7NV72 Cluster: Chromosome... 1162 0.0
gnl|LJGI|TC67578 similar to UniRef100_A7NV72 Cluster: Chromosome... 462 e-129
gnl|LJGI|TC71035 similar to UniRef100_A7NV72 Cluster: Chromosome... 317 4e-86
gnl|LJGI|AV781284 similar to UniRef100_A7NV72 Cluster: Chromosom... 100 2e-20
>gnl|LJGI|TC65244 similar to UniRef100_A7NV72 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 811
Score = 1162 bits (586), Expect = 0.0
Identities = 595/598 (99%)
Strand = Plus / Plus
Query: 6 tatacagggaaaccgagaatactcatgtaaactgaaattcaaagaacaatcaataattga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatacagggaaaccgagaatactcatgtaaactgaaattcaaagaacaatcaataattga 60
Query: 66 acgaaatcctcaccaggttcagggtattgttcaggatagaaatgggaaaacattgtctac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgaaatcctcaccaggttcagggtattgttcaggatagaaatgggaaaacattgtctac 120
Query: 126 attaattggaaaatgggatgacagcatgtactatattaatggagaccatggtgggaaggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaattggaaaatgggatgacagcatgtactatattaatggagaccatggtgggaaggg 180
Query: 186 taaaggttatgaatcatcatcagaagcccatcttctatggaagcggagcaagcctcccaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaaggttatgaatcatcatcagaagcccatcttctatggaagcggagcaagcctcccaa 240
Query: 246 gtttccgactagatataacttcactcgctttgccatcacattaaatgaacttacccctgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttccgactagatataacttcactcgctttgccatcacattaaatgaacttacccctgg 300
Query: 306 attaaaggaaaagctgccacctactgattcaaggttaagacctgatcaaagggatttgga 365
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 301 attaaaggaaaagctgccacctactgattccaggttaagacctgatcaaaggtatttgga 360
Query: 366 aaatgggcagtatgagatagcgaattcagaaaaattacgactagagcagcgacaacggca 425
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatgggcagtatgagatggcgaattcagaaaaattacgactagagcagcgacaacggca 420
Query: 426 ggctcggaagatgcaagagagcggttggaaaccacagtggtttgctagggataaagaaac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggctcggaagatgcaagagagcggttggaaaccacagtggtttgctagggataaagaaac 480
Query: 486 cggtagctaccgcttcttaggagggtattgggaggcccgaaaagaaggaaactggaactc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggtagctaccgcttcttaggagggtattgggaggcccgaaaagaaggaaactggaactc 540
Query: 546 atgtcctgacatttttggccaaattcctcccgatcatctttcagacgaaggataatgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgtcctgacatttttggccaaattcctcccgatcatctttcagacgaaggataatgt 598
>gnl|LJGI|TC67578 similar to UniRef100_A7NV72 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1115
Score = 462 bits (233), Expect = e-129
Identities = 497/585 (84%)
Strand = Plus / Plus
Query: 1 atgcgtatacagggaaaccgagaatactcatgtaaactgaaattcaaagaacaatcaata 60
||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 201 atgcgcatacagggaaaccaagagtactcgtgtaaactgaaattcaaagaacaatctata 260
Query: 61 attgaacgaaatcctcaccaggttcagggtattgttcaggatagaaatgggaaaacattg 120
||||| ||||||||||| |||||||| ||||| ||| | ||||| ||||| |||| |
Sbjct: 261 attgatcgaaatcctcatcaggttcatggtatcgttgaagataggaatggataaaccgta 320
Query: 121 tctacattaattggaaaatgggatgacagcatgtactatattaatggagaccatggtggg 180
|| || || |||||| ||||||||| |||||| | ||| ||||||||||| | ||||
Sbjct: 321 tcaactttgtttggaatatgggatgaaagcatgcattatgttaatggagactacactggg 380
Query: 181 aagggtaaaggttatgaatcatcatcagaagcccatcttctatggaagcggagcaagcct 240
||||| |||||| |||||| | ||||| |||| | | || |||||||| |||||||||
Sbjct: 381 aaggggaaaggtcctgaatctttgtcagatgcccgtttactctggaagcgaagcaagcct 440
Query: 241 cccaagtttccgactagatataacttcactcgctttgccatcacattaaatgaacttacc 300
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccacatttcctactagatataacttcactcgctttgccatcacattaaatgaacttacc 500
Query: 301 cctggattaaaggaaaagctgccacctactgattcaaggttaagacctgatcaaagggat 360
|||||||| ||||| ||| |||||||||| ||||| ||| ||||||| || |||||| ||
Sbjct: 501 cctggattgaaggagaagttgccacctacagattccaggctaagaccagaccaaaggtat 560
Query: 361 ttggaaaatgggcagtatgagatagcgaattcagaaaaattacgactagagcagcgacaa 420
|||||||||||| |||||||||| || ||||||||||| || |||||||||||||| |||
Sbjct: 561 ttggaaaatggggagtatgagatggcaaattcagaaaagttgcgactagagcagcggcaa 620
Query: 421 cggcaggctcggaagatgcaagagagcggttggaaaccacagtggtttgctagggataaa 480
|| ||||| || |||||||||||||| ||||||||||||| |||||||| | |||||||
Sbjct: 621 cgccaggcgcgaaagatgcaagagagtggttggaaaccacggtggtttgtgaaggataaa 680
Query: 481 gaaaccggtagctaccgcttcttaggagggtattgggaggcccgaaaagaaggaaactgg 540
| | ||| | ||||||| ||||||||||||||||||||| || | |||||||| |||
Sbjct: 681 gcgagcgggacataccgctatttaggagggtattgggaggccagagatgaaggaaaatgg 740
Query: 541 aactcatgtcctgacatttttggccaaattcctcccgatcatctt 585
| || ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 741 gattcctgtcctgacatcttcggccaaatcccttcggatcatctt 785
>gnl|LJGI|TC71035 similar to UniRef100_A7NV72 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 588
Score = 317 bits (160), Expect = 4e-86
Identities = 294/339 (86%)
Strand = Plus / Plus
Query: 247 tttccgactagatataacttcactcgctttgccatcacattaaatgaacttacccctgga 306
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9 tttcctactagatataacttcactcgctttgccatcacattaaatgaacttacccntgga 68
Query: 307 ttaaaggaaaagctgccacctactgattcaaggttaagacctgatcaaagggatttggaa 366
|| ||||| ||| |||||||||| ||||| ||| ||||||| || |||||| ||||||||
Sbjct: 69 ttgaaggagaagttgccacctacagattccaggctaagaccagaccaaaggtatttggaa 128
Query: 367 aatgggcagtatgagatagcgaattcagaaaaattacgactagagcagcgacaacggcag 426
|||||| |||||||||| || ||||||||||| || |||||||||||||| ||||| |||
Sbjct: 129 aatggggagtatgagatggcaaattcagaaaagttgcgactagagcagcggcaacgccag 188
Query: 427 gctcggaagatgcaagagagcggttggaaaccacagtggtttgctagggataaagaaacc 486
|| || |||||||||||||| ||||||||||||| |||||||| | |||||||| | |
Sbjct: 189 gcgcgaaagatgcaagagagtggttggaaaccacggtggtttgtgaaggataaagcgagc 248
Query: 487 ggtagctaccgcttcttaggagggtattgggaggcccgaaaagaaggaaactggaactca 546
|| | ||||||| ||||||||||||||||||||| || | |||||||| ||| | ||
Sbjct: 249 gggacataccgctatttaggagggtattgggaggccagagatgaaggaaaatgggattcc 308
Query: 547 tgtcctgacatttttggccaaattcctcccgatcatctt 585
||||||||||| || |||||||| ||| | |||||||||
Sbjct: 309 tgtcctgacatcttcggccaaatcccttcggatcatctt 347
>gnl|LJGI|AV781284 similar to UniRef100_A7NV72 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 494
Score = 99.6 bits (50), Expect = 2e-20
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 424 caggctcggaagatgcaagagagcggttggaaaccacagtggtttgctagggataaagaa 483
||||| || |||||||||||||| ||||||||||||| |||||||| | ||||||||
Sbjct: 372 caggcgcgaaagatgcaagagagtggttggaaaccacggtggtttgtgaaggataaagcg 313
Query: 484 accggtagctaccgcttcttaggagggtattgggaggcccgaaaagaaggaaactggaac 543
| ||| | ||||||| ||||||||||||||||||||| || | |||||||| ||| |
Sbjct: 312 agcgggacataccgctatttaggagggtattgggaggccagagatgaaggaaaatgggat 253
Query: 544 tcatgtcctgacatttttggccaaattcctcccgatcatctt 585
|| ||||||||||| || |||| ||| ||| | |||||||||
Sbjct: 252 tcctgtcctgacatcttcggcccaatcccttcggatcatctt 211