Miyakogusa Predicted Gene
- Lj5g3v0402730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0402730.1 tr|G7IB73|G7IB73_MEDTR Chloroplast unusual
positioning 1A OS=Medicago truncatula GN=MTR_1g016290
PE=,75.31,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL,CUFF.52928.1
(2376 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59824 similar to UniRef100_A7Q4U9 Cluster: Chromosome... 2407 0.0
gnl|LJGI|TC79843 similar to UniRef100_A7Q4U9 Cluster: Chromosome... 502 e-141
>gnl|LJGI|TC59824 similar to UniRef100_A7Q4U9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1279
Score = 2407 bits (1214), Expect = 0.0
Identities = 1214/1214 (100%)
Strand = Plus / Plus
Query: 1 atgaaggaagataataacccattagagaacaggtccaaaccttcaagattttctgatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atgaaggaagataataacccattagagaacaggtccaaaccttcaagattttctgatcaa 125
Query: 61 aaccaacccccacaaccaaagcttcaatcctccaaaggtagcagcaacatgaccaacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aaccaacccccacaaccaaagcttcaatcctccaaaggtagcagcaacatgaccaacaac 185
Query: 121 aatcactcaaaacctaggttgtggggtgcccacattgtcaaaggcttctcagctgataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aatcactcaaaacctaggttgtggggtgcccacattgtcaaaggcttctcagctgataag 245
Query: 181 aagaccaaaaatcctcagcaatcaacggttccaaccaagaaacagaccctgacaacaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aagaccaaaaatcctcagcaatcaacggttccaaccaagaaacagaccctgacaacaacg 305
Query: 241 atttcagatgttgttgttacaacccagaagaataacaacccttttgtccctgctcattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atttcagatgttgttgttacaacccagaagaataacaacccttttgtccctgctcattcc 365
Query: 301 agagtcaagaggtccctcataggtgatttatcatgctccctgaattcccaggttcaccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agagtcaagaggtccctcataggtgatttatcatgctccctgaattcccaggttcaccct 425
Query: 361 catgcgttcccttcgcataggaggcaatcctctactgatttgttcactgagcttgatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 catgcgttcccttcgcataggaggcaatcctctactgatttgttcactgagcttgatcat 485
Query: 421 atgagaagcttgctgcaagaatcgaaggagagggagggtaagctgaatgctgagctggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgagaagcttgctgcaagaatcgaaggagagggagggtaagctgaatgctgagctggtg 545
Query: 481 gagtgtaaggggaagcagagtgaggttgatgagcttgtgaagaaggttgctttgttggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gagtgtaaggggaagcagagtgaggttgatgagcttgtgaagaaggttgctttgttggaa 605
Query: 541 gaagagaagactagtctcaatgagcaattgggttctttgaagagtgtgttggagagaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaagagaagactagtctcaatgagcaattgggttctttgaagagtgtgttggagagaaaa 665
Query: 601 gaggaaggggtgaaaggggaacgcagggatttttgttctgtgcagaatcttgagctggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaggaaggggtgaaaggggaacgcagggatttttgttctgtgcagaatcttgagctggag 725
Query: 661 gttgtggaattgaggaggctgaataaggagctgcagatgcagaagaggaacctcacttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gttgtggaattgaggaggctgaataaggagctgcagatgcagaagaggaacctcacttgc 785
Query: 721 aggctctcttctcttgaagctcagttgccttgtcctgccaactcttcagagagtgacatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aggctctcttctcttgaagctcagttgccttgtcctgccaactcttcagagagtgacatt 845
Query: 781 gttgcaaaaattaaagcggaggcatcattgctcaggcacactaatgaagacctgtctaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gttgcaaaaattaaagcggaggcatcattgctcaggcacactaatgaagacctgtctaag 905
Query: 841 caagtagaaggtttacaaacaagcagattgaatgaggttgaggagcttgcctacttgagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 caagtagaaggtttacaaacaagcagattgaatgaggttgaggagcttgcctacttgagg 965
Query: 901 tgggtgaattcatgtctgagaaacgagttgaagaatacatgttcagcattggagtctgat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tgggtgaattcatgtctgagaaacgagttgaagaatacatgttcagcattggagtctgat 1025
Query: 961 aagccatctagccctcaatctgttatgagcaatagtggagatgattgtgtcagttctttc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 aagccatctagccctcaatctgttatgagcaatagtggagatgattgtgtcagttctttc 1085
Query: 1021 tctgatcaaaccaataggtactcaaaatgtagtattagtacaagtaggttcagtttgata 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tctgatcaaaccaataggtactcaaaatgtagtattagtacaagtaggttcagtttgata 1145
Query: 1081 aagaagccgaaaaagtggcctataactagtgaccatttgtcgcaattagagtgtccagat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 aagaagccgaaaaagtggcctataactagtgaccatttgtcgcaattagagtgtccagat 1205
Query: 1141 agtctcattgagaaaaattggattgaacctgaggtaatgggtagaagccccagtagaaga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 agtctcattgagaaaaattggattgaacctgaggtaatgggtagaagccccagtagaaga 1265
Query: 1201 cactctatcagtgg 1214
||||||||||||||
Sbjct: 1266 cactctatcagtgg 1279
>gnl|LJGI|TC79843 similar to UniRef100_A7Q4U9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 491
Score = 502 bits (253), Expect = e-141
Identities = 258/260 (99%)
Strand = Plus / Plus
Query: 2117 ttgaatggatgcttgataatggaatcattggcaagataaaaattggctcagttaaattgg 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaatggatgcttgataatggaatcattggcaagataaaaattggctcagttaaattgg 60
Query: 2177 ccaaaaactatatgaaaagggtagctatggagcttcaagcaaagtcagcattggataaag 2236
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccnaaaactatatgaaaagggtagctatggagcttcaagcaaagtcagcattggataaag 120
Query: 2237 atcctgcaatggattacatgcttctccaaggtgtgagatttgcttttagaatccatcagt 2296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcctgcaatggattacatgcttctccaaggtgtgagatttgcttttagaatccatcagt 180
Query: 2297 ttgcaggaggttttgatgcggaaacaatgcacgcatttgaggagcttcgcaatcttgctt 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcaggaggttttgatgcggaaacaatgcacgcatttgaggagcttcgcaatcttgctt 240
Query: 2357 ctctacttaacaaaacataa 2376
||||||||||| ||||||||
Sbjct: 241 ctctacttaaccaaacataa 260