Miyakogusa Predicted Gene
- Lj5g3v0391520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0391520.1 Non Chatacterized Hit- tr|D8L9Q6|D8L9Q6_WHEAT
Putative uncharacterized protein OS=Triticum aestivum
,30.57,0.0000000000002,seg,NULL,CUFF.52917.1
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71521 similar to UniRef100_A7P4N2 Cluster: Chromosome... 1820 0.0
gnl|LJGI|AV774637 homologue to UniRef100_A7P4N1 Cluster: Chromos... 159 4e-38
>gnl|LJGI|TC71521 similar to UniRef100_A7P4N2 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (49%)
Length = 1265
Score = 1820 bits (918), Expect = 0.0
Identities = 918/918 (100%)
Strand = Plus / Plus
Query: 1 atggcagacaagccaagtcgatcgctggtgttattcggcgacggtttagcccgttccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggcagacaagccaagtcgatcgctggtgttattcggcgacggtttagcccgttccatc 174
Query: 61 gatccatcacactctcatcttcactctctcgcttccctttcttcatgtggtttcttgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gatccatcacactctcatcttcactctctcgcttccctttcttcatgtggtttcttgtct 234
Query: 121 ctccccaattctccaccctcagaaagcgaggatcagagaactgttagagaattcgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ctccccaattctccaccctcagaaagcgaggatcagagaactgttagagaattcgctgtg 294
Query: 181 cttcttgatgcgccaaacgtgaatgtgcaagtttctgatgatgatagccaaaaggattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cttcttgatgcgccaaacgtgaatgtgcaagtttctgatgatgatagccaaaaggattcg 354
Query: 241 ccggaaaaacaaaccttacctgatcggtttatgggaatgaaagctgctattttgaccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccggaaaaacaaaccttacctgatcggtttatgggaatgaaagctgctattttgaccaac 414
Query: 301 cattcaggtttgaaatcttttagttccaaacttggcttcaatgttcttcaattggatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cattcaggtttgaaatcttttagttccaaacttggcttcaatgttcttcaattggatgca 474
Query: 361 ttggcaaaagattatgatgctggattacatgaaaatgatgttgtggcccttgagctgctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttggcaaaagattatgatgctggattacatgaaaatgatgttgtggcccttgagctgctc 534
Query: 421 aagttgcttggctttcaagaagggaaggtgcaggacagtaacaactttgatcttgttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagttgcttggctttcaagaagggaaggtgcaggacagtaacaactttgatcttgttttc 594
Query: 481 tttcacattggagctggtgaaaagaatgtggagtatatcaatgcattggttggtggttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tttcacattggagctggtgaaaagaatgtggagtatatcaatgcattggttggtggttta 654
Query: 541 atgaaccaagctcaacccggatctgacatcagttctcgtctgcacttgtcccttgtcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 atgaaccaagctcaacccggatctgacatcagttctcgtctgcacttgtcccttgtcatg 714
Query: 601 agctatggcaaggtctcggaggatgacgaatccaagttttcagtgtcaaagagggcagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agctatggcaaggtctcggaggatgacgaatccaagttttcagtgtcaaagagggcagat 774
Query: 661 gagaaatcttatctttcactgctctatcctctacaaagttatgctatgaaaggaggattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gagaaatcttatctttcactgctctatcctctacaaagttatgctatgaaaggaggattt 834
Query: 721 cctcggaaggatgtgaggctccattctcctttgttgattgctcaatggcaagatgcagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cctcggaaggatgtgaggctccattctcctttgttgattgctcaatggcaagatgcagtg 894
Query: 781 actcgcaaggataatgcagagaggttttatttccaagacttcatggagcatggtggaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 actcgcaaggataatgcagagaggttttatttccaagacttcatggagcatggtggaaat 954
Query: 841 cttacaataccggcagataggttcttgcatgagatagcctttaagctttggaaagctcct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 cttacaataccggcagataggttcttgcatgagatagcctttaagctttggaaagctcct 1014
Query: 901 aagtatggagcctaatta 918
||||||||||||||||||
Sbjct: 1015 aagtatggagcctaatta 1032
>gnl|LJGI|AV774637 homologue to UniRef100_A7P4N1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 521
Score = 159 bits (80), Expect = 4e-38
Identities = 121/128 (94%), Gaps = 5/128 (3%)
Strand = Plus / Minus
Query: 796 gcagagag-gttttatttcca-aga-cttcatggagca-tggtggaaatcttacaatacc 851
|||||||| |||||||||||| ||| | |||||||||| ||||||||||||||| |||||
Sbjct: 265 gcagagagcgttttatttccacagaccctcatggagcactggtggaaatcttaccatacc 206
Query: 852 ggcagataggttcttgcatgagatagccttta-agctttggaaagctcctaagtatggag 910
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 ggcagataggttcttgcatgagatagcctttacagctttggaaagctcctaagtatggag 146
Query: 911 cctaatta 918
||||||||
Sbjct: 145 cctaatta 138
Score = 81.8 bits (41), Expect = 7e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 575 ctcgtctgcacttgtcccttgtcatgagctatggcaaggtc 615
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctcgtctgcacttgtcccttgtcatgagctatggcaaggtc 481