Miyakogusa Predicted Gene
- Lj5g3v0381140.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0381140.2 Non Chatacterized Hit- tr|C6T7K8|C6T7K8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51862 PE,92.42,0,POLLEN
SPECIFIC PROTEIN SF21,Pollen specific protein SF21; N-MYC DOWNSTREAM
REGULATED,Ndr; alpha/bet,CUFF.52921.2
(636 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58490 similar to UniRef100_A7P4I7 Cluster: Chromosome... 1078 0.0
gnl|LJGI|TC66897 similar to UniRef100_A7P4I7 Cluster: Chromosome... 783 0.0
gnl|LJGI|TC59830 similar to UniRef100_A7PEA8 Cluster: Chromosome... 129 2e-29
gnl|LJGI|TC82643 similar to UniRef100_A7Q5X6 Cluster: Chromosome... 80 2e-14
>gnl|LJGI|TC58490 similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 1224
Score = 1078 bits (544), Expect = 0.0
Identities = 544/544 (100%)
Strand = Plus / Plus
Query: 1 atgtgtatgggagtaacggctggagcttacattcttaccttatttgctatgaagtataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgtgtatgggagtaacggctggagcttacattcttaccttatttgctatgaagtataga 436
Query: 61 gaacgtgttcttggtttgatacttgtttctcctctttgtaaagcaccatcttggactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaacgtgttcttggtttgatacttgtttctcctctttgtaaagcaccatcttggactgaa 496
Query: 121 tggttgtacaacaaggtcttgtcgaatttactctacttttatggcatgtgtggggtggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tggttgtacaacaaggtcttgtcgaatttactctacttttatggcatgtgtggggtggta 556
Query: 181 aaagaaatattgctaaagcgatactttagtaaggaagttcgaggcagtggtaatttgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaagaaatattgctaaagcgatactttagtaaggaagttcgaggcagtggtaatttgcca 616
Query: 241 gagttggatatagttcaagcatgccgaaggtccttagatgagaggcagagtttgaatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gagttggatatagttcaagcatgccgaaggtccttagatgagaggcagagtttgaatgtg 676
Query: 301 tggcggttccttgaagctattaatgggagatctgacataagtgaaggattgagaaaattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tggcggttccttgaagctattaatgggagatctgacataagtgaaggattgagaaaattg 736
Query: 361 cagtgtcgctcactaatttttgttggggacatgtctccttttcactctgaggctctccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cagtgtcgctcactaatttttgttggggacatgtctccttttcactctgaggctctccac 796
Query: 421 atgaattctaagttagatagacgatttagtgccttggtcgaggttcaagcttgtgggtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atgaattctaagttagatagacgatttagtgccttggtcgaggttcaagcttgtgggtcg 856
Query: 481 atggtaacagaggagcaaccccatgcgatgctagtaccaatggagtactttctcatggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 atggtaacagaggagcaaccccatgcgatgctagtaccaatggagtactttctcatggga 916
Query: 541 tatg 544
||||
Sbjct: 917 tatg 920
>gnl|LJGI|TC66897 similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1035
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 237 gccagagttggatatagttcaagcatgccgaaggtccttagatgagaggcagagtttgaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccagagttggatatagttcaagcatgccgaaggtccttagatgagaggcagagtttgaa 60
Query: 297 tgtgtggcggttccttgaagctattaatgggagatctgacataagtgaaggattgagaaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgtggcggttccttgaagctattaatgggagatctgacataagtgaaggattgagaaa 120
Query: 357 attgcagtgtcgctcactaatttttgttggggacatgtctccttttcactctgaggctct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgcagtgtcgctcactaatttttgttggggacatgtctccttttcactctgaggctct 180
Query: 417 ccacatgaattctaagttagatagacgatttagtgccttggtcgaggttcaagcttgtgg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacatgaattctaagttagatagacgatttagtgccttggtcgaggttcaagcttgtgg 240
Query: 477 gtcgatggtaacagaggagcaaccccatgcgatgctagtaccaatggagtactttctcat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgatggtaacagaggagcaaccccatgcgatgctagtaccaatggagtactttctcat 300
Query: 537 gggatatggtttgtatagaccatccaaactaagtgttagcccaagaagtcccttgagtcc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggatatggtttgtatagaccatccaaactaagtgttagcccaagaagtcccttgagtcc 360
Query: 597 atcttgcatttctcctgagctttattcaccagaga 631
|||||||||||||||||||||||||||||||||||
Sbjct: 361 atcttgcatttctcctgagctttattcaccagaga 395
>gnl|LJGI|TC59830 similar to UniRef100_A7PEA8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1488
Score = 129 bits (65), Expect = 2e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 1 atgtgtatgggagtaacggctggagcttacattcttaccttatttgctatgaagtataga 60
||||||||||||||||||||||| |||||||| ||||| | ||||| ||||| |||||
Sbjct: 501 atgtgtatgggagtaacggctggtgcttacatccttactctttttgcaatgaaatatagg 560
Query: 61 gaacgtgttcttggtttgatacttgtttctcctctttgtaaagcaccatcttggactgaa 120
||||||||| ||||||| ||||| || ||||| | || |||||||| ||||||||||||
Sbjct: 561 gaacgtgttgttggtttaatactcgtatctcccttatgcaaagcaccttcttggactgaa 620
Query: 121 tggttgtacaacaaggtcttgtcgaattt 149
||||| || |||||||| ||||||||||
Sbjct: 621 tggttatataacaaggtaatgtcgaattt 649
Score = 105 bits (53), Expect = 3e-22
Identities = 170/209 (81%)
Strand = Plus / Plus
Query: 343 gaaggattgagaaaattgcagtgtcgctcactaatttttgttggggacatgtctcctttt 402
|||||||||| || ||| |||| ||| | || |||||||| || |||| ||||||||
Sbjct: 843 gaaggattgaaaagattaaagtgccgcacgcttatttttgtaggtgacagttctcctttc 902
Query: 403 cactctgaggctctccacatgaattctaagttagatagacgatttagtgccttggtcgag 462
|| || |||||||||||||||| ||| || | ||||| |||||||||||||||| |||
Sbjct: 903 cattccgaggctctccacatgacttcaaaacttgataggagatttagtgccttggttgag 962
Query: 463 gttcaagcttgtgggtcgatggtaacagaggagcaaccccatgcgatgctagtaccaatg 522
|| || |||||||| || ||||| ||||| || || || ||||| ||||| |||| ||
Sbjct: 963 gtccaggcttgtggatcaatggttacagaagaacagccacatgcaatgctgatacctttg 1022
Query: 523 gagtactttctcatgggatatggtttgta 551
||||||||||||||||| ||||| |||||
Sbjct: 1023 gagtactttctcatggggtatgggttgta 1051
>gnl|LJGI|TC82643 similar to UniRef100_A7Q5X6 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1360
Score = 79.8 bits (40), Expect = 2e-14
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 19 gctggagcttacattcttaccttatttgctatgaagtatagagaacgtgttcttggtttg 78
||||| |||||||| || || ||||||| ||||| || | ||| || || ||||| |||
Sbjct: 538 gctggtgcttacatcctgacactatttgccatgaaatacaaagagcgagtgcttggattg 597
Query: 79 atacttgtttctcctctttgtaaagcaccatcttggactgaatggttgtacaacaaggtc 138
|| |||||||| ||| ||||||||| ||| || |||||||||||| | ||||||||||||
Sbjct: 598 attcttgtttcgcctatttgtaaagaaccttcatggactgaatggctatacaacaaggtc 657
Query: 139 ttgtcgaatttactctacttttatggcatgtg 170
||| |||||| | ||||| ||||| |||||
Sbjct: 658 ttgatgaatttgttgtacttctatggtatgtg 689