Miyakogusa Predicted Gene
- Lj5g3v0380100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0380100.1 tr|Q2HTC4|Q2HTC4_MEDTR Conserved oligomeric Golgi
complex component 4, related OS=Medicago
truncatul,84.63,0,COG4,Conserved oligomeric Golgi complex, subunit 4;
coiled-coil,NULL; COG4 transport protein,Conserv,CUFF.52896.1
(1352 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81628 homologue to UniRef100_Q2HTC4 Cluster: Conserve... 1471 0.0
>gnl|LJGI|TC81628 homologue to UniRef100_Q2HTC4 Cluster: Conserved oligomeric Golgi
complex component 4, related; n=1; Medicago
truncatula|Rep: Conserved oligomeric Golgi complex
component 4, related - Medicago truncatula (Barrel
medic), partial (31%)
Length = 778
Score = 1471 bits (742), Expect = 0.0
Identities = 770/778 (98%), Gaps = 1/778 (0%)
Strand = Plus / Plus
Query: 23 ctccccgcggcaatggatcggagga-agatatcaccggcaacggcggcgccgtcacgtcg 81
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccccgcggcaatggatcggaggagagatatcaccggcaacggcggcgccgtcacgtcg 60
Query: 82 tcaatagatttcggcaaagcagaggcggtggagtacgtgcgttcattaactgacgtcgga 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaatagatttcggcaaagcagaggcggtggagtacgtgcgttcattaactgacgtcgga 120
Query: 142 gcaatgacgcgcctcctccacgagtgcattgctcaccagcgagccctcgacacgcaactc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaatgacgcgcctcctccacgagtgcattgctcaccagcgagccctcgacacgcaactc 180
Query: 202 gatgacctcctctcccagcgcgccgacctcgaccgccacctcgtccagctccagcgctcc 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgacctcctctcccagcgcgccgacctcgaccgccacctcgtccagctccagcgctcc 240
Query: 262 tccgacgtcctcgatatcgtcaaatccgactccgatcacatgctctccaatgtctcctcc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccgacgtcctcgatatcgtcaaatccgactccgatcacatgctctccaatgtctcctcc 300
Query: 322 acctccgacctcgccgacagcgtcagccgcaaggttcgcgaactcgacctcgcacaatcg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acctccgacctcgccgacagcgtcagccgcaaggttcgcgaactcgacctcgcacaatcg 360
Query: 382 cgcgtcaggtccacgctccaccgcatcgacgccgtcgttgagcgcggaaactgcctcgac 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcgtcaggtccacgctccaccgcatcgacgccgtcgttgagcgcggaaactgcctcgac 420
Query: 442 ggcggcctgcgagccctcgacgaggaggattacgagtccgctgctagatacgtccaaacg 501
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 ggcgtcctgcgagccctcgacgaggaggattacgagtccgctgctagatacgtccagacg 480
Query: 502 tttctccagatcgacgcgcagttcaaggattccggctccgatcagattcagcgtgagcgg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 tttctccagatcgacgcgcagttcaaggattccggctccgatcagattcagcgcgagcgg 540
Query: 562 ttgatgactgcgaagaagcagctcgaagggatcgtgcggaagaagctctcctccgccgtg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgatgactgcgaagaagcagctcgaagggatcgtgcggaagaagctctcctccgccgtg 600
Query: 622 gatcagcgcgatcacaacgcgattctgaggtttgttcgtctttacacgcctttaggtttg 681
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 gatcagcgcgatcacaacgcgattctgaggtttgttcgtctctacacgcctttaggtttg 660
Query: 682 gaagaagagggtttgcaggtttatgttgggtatttgaagaaggtgattgggatgaggtct 741
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagaagagggttcgcaggtttatgttgggtatttgaagaaggtgattgggatgaggtct 720
Query: 742 aggatggagtttgagcaattggttgagtccatggagcatagtaatagtaatgtgaatt 799
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 721 aggatggtgtttgagcaattggttgagtccatggagcatagttatagtaatgtgaatt 778