Miyakogusa Predicted Gene
- Lj5g3v0370010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0370010.1 tr|G7J539|G7J539_MEDTR MscS-Like mechanosensitive
ion channel MSCL8 OS=Medicago truncatula
GN=MTR_3g,74.9,0,MS_channel,Mechanosensitive ion channel MscS;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Sm-li,NODE_63428_length_2613_cov_17.577879.path2.1
(1488 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72047 920 0.0
gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed... 791 0.0
gnl|LJGI|FS335612 similar to UniRef100_A7NUM4 Cluster: Chromosom... 56 7e-07
>gnl|LJGI|TC72047
Length = 656
Score = 920 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 1 atggcctatttgggttcaatgggattgtcccatggcgttaggctattatacactagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atggcctatttgggttcaatgggattgtcccatggcgttaggctattatacactagtgat 252
Query: 61 agaaaatgtagtttttgtcagaggcccttgcctggtgaccggttgtgttttgttacaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agaaaatgtagtttttgtcagaggcccttgcctggtgaccggttgtgttttgttacaatc 312
Query: 121 aatctttcacctgttagtttgaggcagaattcttcagcactcctattttctggattacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatctttcacctgttagtttgaggcagaattcttcagcactcctattttctggattacat 372
Query: 181 gccccacttaagcctgtaccttctagatgtaatgttttgctgtgtcggtctgtcctaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gccccacttaagcctgtaccttctagatgtaatgttttgctgtgtcggtctgtcctaacg 432
Query: 241 ccagctggagggtttgaggcgccgctagtgaaagcagctactatttctttgtcaaggtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccagctggagggtttgaggcgccgctagtgaaagcagctactatttctttgtcaaggtca 492
Query: 301 tataatgctatatcaagaccaattttgcttcaattgatccctgcccttggtatcattggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tataatgctatatcaagaccaattttgcttcaattgatccctgcccttggtatcattggc 552
Query: 361 tttgctttctttggtcttgagccgttcctgcgcttgagcagggttctatttctccaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tttgctttctttggtcttgagccgttcctgcgcttgagcagggttctatttctccaagat 612
Query: 421 agagttgatagaagttggaagaaaagtagttcacgttatattat 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agagttgatagaagttggaagaaaagtagttcacgttatattat 656
>gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (20%)
Length = 424
Score = 791 bits (399), Expect = 0.0
Identities = 416/424 (98%)
Strand = Plus / Plus
Query: 813 cacagtattactttcccttgcaggtcgtgagatatttacaaacttcctttcaagtgtaat 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacagtattactttcccttgcaggtcgtgagatatttacaaacttcctttcaagtgtaat 60
Query: 873 gatccacgcaactcgtccatttgtggtgaatgagcggattaaaacgaagattaaaggata 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatccacgcaactcgtccatttgtggtgaatgagcggattaaaacgaagattaaaggata 120
Query: 933 tgaggtttctggtaaagttgagcatgtgggatggtggtcaccaacactagttagaggtgc 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaggtttctggtaaagttgagcatgtgggatggtggtcaccaacactagttagaggtgc 180
Query: 993 tgattgtgaagcagttcatattcctaatcacaagttgagtgtaaatgttgtgaggaatct 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgattgtgaagcagttcatattcctaatcacaagttgagtgtaaatgttgtgaggaatct 240
Query: 1053 tagaatgaaatctcattggcgcattaagactcatcttgctattagtcacatggatgttag 1112
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagtatgaaatctcattggcgcattaagactcatcttgctattagtcacatggatgttag 300
Query: 1113 caagattaatagtatcatagctgatatgcggaaggttttggcgaaaaatcctcaagtaga 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagattaatagtatcatagctgatatgcggaaggttttggcgaaaaatcctcaagtaga 360
Query: 1173 gcagaaaaaattgcacagaagggnnnnnnnggaggatatcaatccagaaaatcaggctct 1232
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 gcagaaaaaattgcacagaagggtttttttggaggatatcaatccagaaaatcaggctct 420
Query: 1233 tatg 1236
||||
Sbjct: 421 tatg 424
>gnl|LJGI|FS335612 similar to UniRef100_A7NUM4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 729
Score = 56.0 bits (28), Expect = 7e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 334 ttgatccctgcccttggtatcattggctttgctttctttggtcttgagccgttcctgcgc 393
|||||||| ||||||||||| |||| ||||||| | | |||||||||||| |||| ||
Sbjct: 534 ttgatcccagcccttggtattattgcctttgctgtttgtggtcttgagccactcctacgt 593
Query: 394 ttgagcagggttctatttct 413
| |||||| ||||||||||
Sbjct: 594 ctcagcaggattctatttct 613