Miyakogusa Predicted Gene
- Lj5g3v0369990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0369990.1 tr|G7J535|G7J535_MEDTR MscS family inner membrane
protein ynaI OS=Medicago truncatula GN=MTR_3g10028,80.34,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
MS_channel,Mechanosensitive ion channel M,CUFF.52954.1
(2109 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335612 similar to UniRef100_A7NUM4 Cluster: Chromosom... 1013 0.0
gnl|LJGI|FS362116 similar to UniRef100_A6XN19 Cluster: Expressed... 833 0.0
gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed... 333 3e-90
gnl|LJGI|BP052864 244 2e-63
gnl|LJGI|TC72047 56 9e-07
>gnl|LJGI|FS335612 similar to UniRef100_A7NUM4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 729
Score = 1013 bits (511), Expect = 0.0
Identities = 525/532 (98%)
Strand = Plus / Plus
Query: 1 atggtctacccgggttcaatgcaattgtcgcgtgacgttaggctcaagagccatggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggtctacccgggttcaatgcaattgtcgcgtgacgttaggctcaagagccatggcaga 257
Query: 61 tttcgcagtctccatcataatccgatgggggttgctagattacatttggtcaccatcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttcgcagtctccatcataatccgatgggggttgctagattacatttggtcaccatcaat 317
Query: 121 cttttaccaagtagtttgaagcatgattctttggatctacgtcttctgaatagagttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cttttaccaagtagtttgaagcatgattctttggatctacgtcttctgaatagagttcat 377
Query: 181 gccccactaaagcatgtgccatccagatctaatatttttgtatgtcggtctgtcattata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gccccactaaagcatgtgccatccagatctaatatttttgtatgtcggtctgtcattata 437
Query: 241 ccgagtggagggagtgggattccactgatgaaatctgctagtgnnnnnnnatcaaggtca 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 438 ccgagtggagggagtgggattccactgatgaaatctgctagtgtttttttatcaaggtca 497
Query: 301 tatgatgctttactaggaagccctattttgctccgcttgatcccagcccttggtattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tatgatgctttactaggaagccctattttgctccgcttgatcccagcccttggtattatt 557
Query: 361 gcctttgctgtttgtggtcttgagccactcctacgtctcagcaggattctatttcttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcctttgctgtttgtggtcttgagccactcctacgtctcagcaggattctatttcttcaa 617
Query: 421 agaactgacactgacagtagttggaacaaaagtagttcgcgatatataatgacatcttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agaactgacactgacagtagttggaacaaaagtagttcgcgatatataatgacatcttac 677
Query: 481 tttcagccaatactgttgtggacaggggcaatgctcatatgcagggcattag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tttcagccaatactgttgtggacaggggcaatgctcatatgcagggcattag 729
>gnl|LJGI|FS362116 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (6%)
Length = 553
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Minus
Query: 1690 gatagctcagttgagaagacctccaaaaccatgcaaccgaaaaaggaaagtgcaggagat 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gatagctcagttgagaagacctccaaaaccatgcaaccgaaaaaggaaagtgcaggagat 494
Query: 1750 gtaagaaagggaagtgcagtacctgcatctaaaaacctttcacaaagtgctgtgcctgaa 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtaagaaagggaagtgcagtacctgcatctaaaaacctttcacaaagtgctgtgcctgaa 434
Query: 1810 atttctcctgttacatcccatgagtctggtactgcttcgcagtcaaagcaagatggagag 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atttctcctgttacatcccatgagtctggtactgcttcgcagtcaaagcaagatggagag 374
Query: 1870 aaatcttctgtaacttcatcacctgttaggtctcctttggaggagaacattcttcttgag 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaatcttctgtaacttcatcacctgttaggtctcctttggaggagaacattcttcttgag 314
Query: 1930 gttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatgacttcatctcct 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatgacttcatctcct 254
Query: 1990 acacctgcagagtcacaagaatttgctgtccaaaggaatgggagtggacctccttctaac 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acacctgcagagtcacaagaatttgctgtccaaaggaatgggagtggacctccttctaac 194
Query: 2050 aaggataagaaggatggtcctatatcttcatttccaactactaagcagaatgagtagatt 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaggataagaaggatggtcctatatcttcatttccaactactaagcagaatgagtagatt 134
>gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (20%)
Length = 424
Score = 333 bits (168), Expect = 3e-90
Identities = 345/404 (85%)
Strand = Plus / Plus
Query: 835 cttgcaggtcgcgagatattcacgaacttcctttcaagtataatgattcatgcgacccgg 894
||||||||||| |||||||| || ||||||||||||||| ||||||| || || || ||
Sbjct: 17 cttgcaggtcgtgagatatttacaaacttcctttcaagtgtaatgatccacgcaactcgt 76
Query: 895 ccatttattttaaacgagtggattcaaacaaagattgaaggatatgaggtttctggtacc 954
|||||| | | || ||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 77 ccatttgtggtgaatgagcggattaaaacgaagattaaaggatatgaggtttctggtaaa 136
Query: 955 gttgagcatgtaggctggtggtcaccaaccattgtgagaggtgatgatcgtgaggcagtt 1014
||||||||||| || |||||||||||||| | || ||||||| |||| |||| ||||||
Sbjct: 137 gttgagcatgtgggatggtggtcaccaacactagttagaggtgctgattgtgaagcagtt 196
Query: 1015 catattcctaatcacaagttcactgtaaatgttgttagaaatcttagtcagaaaactcat 1074
|||||||||||||||||||| | |||||||||||| || ||||||||| |||| |||||
Sbjct: 197 catattcctaatcacaagttgagtgtaaatgttgtgaggaatcttagtatgaaatctcat 256
Query: 1075 tggcgtatcaagagttacattgctatcagtcacttggatgttaacaaaattaatattatt 1134
||||| || |||| | | ||||||| |||||| ||||||||| ||| ||||||| |||
Sbjct: 257 tggcgcattaagactcatcttgctattagtcacatggatgttagcaagattaatagtatc 316
Query: 1135 gtagctgatatgcgcaaggttttggctaaaaatcctcaagtagagcagcaaagattgcac 1194
||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 317 atagctgatatgcggaaggttttggcgaaaaatcctcaagtagagcagaaaaaattgcac 376
Query: 1195 agaagggtctttttggagaatgtaaatcctgaaaatcagtctct 1238
|||||||| ||||||||| || | ||||| ||||||||| ||||
Sbjct: 377 agaagggtttttttggaggatatcaatccagaaaatcaggctct 420
>gnl|LJGI|BP052864
Length = 380
Score = 244 bits (123), Expect = 2e-63
Identities = 181/195 (92%), Gaps = 4/195 (2%)
Strand = Plus / Minus
Query: 1919 ttcttcttgaggttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatga 1978
|||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 377 ttcttcttgaggttgctcttgaaggctccaagcgactgcttcccattgaggaagaaatga 318
Query: 1979 ctt-cat-ctcctacacctgcagagt-cacaagaatttgctgt-ccaaaggaatgggagt 2034
||| ||| |||||||||||||||||| ||| |||||||||||| || |||||||||||||
Sbjct: 317 cttgcatgctcctacacctgcagagtgcaccagaatttgctgtgcccaaggaatgggagt 258
Query: 2035 ggacctccttctaacaaggataagaaggatggtcctatatcttcatttccaactactaag 2094
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 257 ggacctccttctaaccaggataagaaggatggtcctatatcttcatttcccactactaag 198
Query: 2095 cagaatgagtagatt 2109
| |||||||||||||
Sbjct: 197 ccgaatgagtagatt 183
>gnl|LJGI|TC72047
Length = 656
Score = 56.0 bits (28), Expect = 9e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 337 ttgatcccagcccttggtattattgcctttgctgtttgtggtcttgagccactcctacgt 396
|||||||| ||||||||||| |||| ||||||| | | |||||||||||| |||| ||
Sbjct: 526 ttgatccctgcccttggtatcattggctttgctttctttggtcttgagccgttcctgcgc 585
Query: 397 ctcagcaggattctatttct 416
| |||||| ||||||||||
Sbjct: 586 ttgagcagggttctatttct 605