Miyakogusa Predicted Gene

Lj5g3v0358760.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0358760.1 Non Chatacterized Hit- tr|A5BVL5|A5BVL5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,35.37,0.000005,DUF239,Domain of unknown function DUF239;
DUF4409,Domain of unknown function DUF4409; FAMILY NOT
NAM,gene.g58730.t1.1
         (927 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO041721 weakly similar to UniRef100_A7P4H2 Cluster: Ch...   747   0.0  

>gnl|LJGI|GO041721 weakly similar to UniRef100_A7P4H2 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 758

 Score =  747 bits (377), Expect = 0.0
 Identities = 377/377 (100%)
 Strand = Plus / Minus

                                                                       
Query: 551 aggacccagatactaataattggtggatgcaatttggtgagaagaacattggttattggc 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aggacccagatactaataattggtggatgcaatttggtgagaagaacattggttattggc 407

                                                                       
Query: 611 cagcagagctatttgaatcaatacgttacaatgcagcatcagtggagtggggtggtgaag 670
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cagcagagctatttgaatcaatacgttacaatgcagcatcagtggagtggggtggtgaag 347

                                                                       
Query: 671 tttacagcacaagcattgggaaaactcctcacactggaacagacatgggttgtggaagat 730
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttacagcacaagcattgggaaaactcctcacactggaacagacatgggttgtggaagat 287

                                                                       
Query: 731 ttgctactgataagttagaagcggcttcagtgacgaggattagaattcatgacaattctg 790
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgctactgataagttagaagcggcttcagtgacgaggattagaattcatgacaattctg 227

                                                                       
Query: 791 ccatgtggaagttccctgaatgggtttatgaatactcagatgaatatcgttgttatgatg 850
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccatgtggaagttccctgaatgggtttatgaatactcagatgaatatcgttgttatgatg 167

                                                                       
Query: 851 tttggtacgttggagattacgttgaagatcctctgttatattttggagggcctggtagaa 910
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tttggtacgttggagattacgttgaagatcctctgttatattttggagggcctggtagaa 107

                            
Query: 911 acccaatgtgcccatag 927
           |||||||||||||||||
Sbjct: 106 acccaatgtgcccatag 90