Miyakogusa Predicted Gene
- Lj5g3v0336570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0336570.1 tr|B9GNL0|B9GNL0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_816437 PE=4
SV=1,84.14,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Glyco_tranf_2_3,NULL; Nucleotide-diphospho-sugar tr,CUFF.52876.1
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60677 similar to UniRef100_A7NUD0 Cluster: Chromosome... 1279 0.0
gnl|LJGI|TC77030 homologue to UniRef100_A7NUD0 Cluster: Chromoso... 620 e-177
gnl|LJGI|TC75843 similar to UniRef100_A7NUD0 Cluster: Chromosome... 96 1e-18
gnl|LJGI|TC76218 similar to UniRef100_A7R6Q7 Cluster: Chromosome... 86 1e-15
gnl|LJGI|TC70324 similar to UniRef100_A7PVM1 Cluster: Chromosome... 76 1e-12
gnl|LJGI|BP039019 72 2e-11
gnl|LJGI|TC62147 similar to UniRef100_A7PME8 Cluster: Chromosome... 70 6e-11
gnl|LJGI|AV407297 homologue to UniRef100_A7PME8 Cluster: Chromos... 64 4e-09
>gnl|LJGI|TC60677 similar to UniRef100_A7NUD0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1040
Score = 1279 bits (645), Expect = 0.0
Identities = 657/661 (99%)
Strand = Plus / Plus
Query: 1 atggcacctatgttcaattggtgggggaaggagaagaaccaccgcggtggcggaacccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atggcacctatgttcaattggtgggggaaggagaagaaccaccgcggtggcggaacccct 439
Query: 61 gtggtggtcaaaatggagaatccgaactggtccatggtggagcttgaaggtccctccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtggtggtcaaaatggagaatccgaactggtccatggtggagcttgaaggtccctccgat 499
Query: 121 gaagatttcatcattgcagacccttcttcagggattcacagagacaaaggaagagggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagatttcatcattgcagacccttcttcagggattcacagagacaaaggaagagggaag 559
Query: 181 aacgccaagcagctgacatgggttctccttctcaaagctcacagagccgcaggttgtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aacgccaagcagctgacatgggttctccttctcaaagctcacagagccgcaggttgtctc 619
Query: 241 gcctctgtggcccctgcattgttcagcctcgtctccgccgtgaaacgccgcgtggcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcctctgtggcccctgcattgttcagcctcgtctccgccgtgaaacgccgcgtggcttcc 679
Query: 301 gggagaaccgatgttgacggcgagggtgtcggtggtgggagggggaacgagagtgccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gggagaaccgatgttgacggcgagggtgtcggtggtgggagggggaacgagagtgccacc 739
Query: 361 gtgaggacaagattctattcctgcatcaaggtgtttctctgggtttcggttcttcttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtgaggacaagattctattcctgcatcaaggtgtttctctgggtttcggttcttcttctc 799
Query: 421 tgttttgaggttgctgcgtacttcaaaggttggcatttcggtgcaccgagtcttcagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgttttgaggttgctgcgtacttcaaaggttggcatttcggtgcaccgagtcttcagttt 859
Query: 481 gagaatttgtgggtttcttcttcgtttggtgtgaagggtgtgtttgattggatttattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gagaatttgtgggtttcttcttcgtttggtgtgaagggtgtgtttgattggatttattct 919
Query: 541 aggtgggttttgactcgtgtggagtatcttaccccacctcttcagtttctggcatatatg 600
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 920 aggtgggttttgactcgtgtggagtatcttgctccacctcttcagtttctggcatatatg 979
Query: 601 tggattattctctgcattattcagagtttggataggttagtcctctgtttaggttgtttt 660
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 tgtattattctcttcattattcagagtttggataggttagtcctctgtttaggttgtttt 1039
Query: 661 t 661
|
Sbjct: 1040 t 1040
>gnl|LJGI|TC77030 homologue to UniRef100_A7NUD0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 885
Score = 620 bits (313), Expect = e-177
Identities = 329/337 (97%)
Strand = Plus / Plus
Query: 1785 aagtgcatatgagtgggttgttaccaagaaatcgggtcgttcctccgagggcgatcttgt 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtgcatatgagtgggttgttaccaagaaatcgggtcgttcctccgagggcgatcttgt 60
Query: 1845 ttccttgatagagaaaggaccaaagcatcaaagaggggtctctgtgcctgatcttgagga 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttccttgatagagaaaggaccaaagcatcaaagaggggtctctgtgcctgatcttgagga 120
Query: 1905 acttaaagaagaaatccaacttcaggagaaaaaggcatcaaagnnnnnnnngcataatag 1964
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 acttaaagaagaaatccaacttcaggagaaaaaggcatcaaagaaaaaaaagcataatag 180
Query: 1965 aatctacatgaaggagcttgctttggcctttctactcctaacagcttcagcaaggagtct 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatctacatgaaggagcttgctttggcctttctactcctaacagcttcagcaaggagtct 240
Query: 2025 cctttcagctcagggaattcacttctacttcttgctattccaaggcatatcattcctctt 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctttcagctcagggaattcacttctacttcttgctattccaaggcatatcattcctctt 300
Query: 2085 agttggtctagacttgatcggcgaacaagttgactga 2121
|||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttggtctagacttgatcggcgaacaagttgactga 337
>gnl|LJGI|TC75843 similar to UniRef100_A7NUD0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 545
Score = 95.6 bits (48), Expect = 1e-18
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1972 atgaaggagcttgctttggcctttctactcctaacagcttcagcaaggagtctcctttca 2031
||||||||||| |||||| ||||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 6 atgaaggagctggctttgcactttctacttctaacagcctcagctaggagtctcctctct 65
Query: 2032 gctcagggaattcacttctacttcttgctatt 2063
|||||||| || | ||||||||||||||||||
Sbjct: 66 gctcaggggatccccttctacttcttgctatt 97
>gnl|LJGI|TC76218 similar to UniRef100_A7R6Q7 Cluster: Chromosome undetermined
scaffold_1378, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1378,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (83%)
Length = 1363
Score = 85.7 bits (43), Expect = 1e-15
Identities = 145/179 (81%)
Strand = Plus / Plus
Query: 1285 ggtggttggttggagaggaccaccgtggaagacatggacattgccgttagagctcatctt 1344
||||| ||||||||| | || || ||||| |||||||| ||||| ||| | ||||||||
Sbjct: 45 ggtggctggttggagcgaacaactgtggaggacatggatattgctgttcgtgctcatctc 104
Query: 1345 catggctggaaattcatcttcctcaatgatgttgagtgccagtgtgagctaccagaatct 1404
||| ||||| ||||| || |||||||||||| |||||| ||||| || ||||| |
Sbjct: 105 tgtggatggaagttcatatttctcaatgatgttaagtgcctttgtgaacttccagagaca 164
Query: 1405 tatgaagcctataggaaacagcaacatagatggcactctgggccaatgcaattgttccg 1463
|||||||| |||| |||||| ||||| | ||||| ||||| |||||||| ||||||||
Sbjct: 165 tatgaagcatataagaaacaacaacaccgctggcattctggtccaatgcagttgttccg 223
Score = 69.9 bits (35), Expect = 6e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 1711 ccttaccttctctttgagaacaccatgtcagttaccaaattcaatgccatgatctctgg 1769
||||||||||| ||||||||||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 471 ccttaccttctatttgagaacactatgtcagtaactaaatttaatgccatgatatctgg 529
>gnl|LJGI|TC70324 similar to UniRef100_A7PVM1 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 850
Score = 75.8 bits (38), Expect = 1e-12
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 1726 gagaacaccatgtcagttaccaaattcaatgccatgatctctggtctcttccagctcgga 1785
|||||||||||||| || |||||||||||||||||| | || ||||| |||||||| |||
Sbjct: 1 gagaacaccatgtcggtaaccaaattcaatgccatggtatccggtctgttccagctggga 60
Query: 1786 agtgcatatgagtgggttgttaccaagaaatcgggtcg 1823
|| |||| || ||| | |||||||| ||||| |||||
Sbjct: 61 agctcatacgaatggatcgttaccaaaaaatccggtcg 98
>gnl|LJGI|BP039019
Length = 543
Score = 71.9 bits (36), Expect = 2e-11
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 1118 caagatggtcttttgtgaataaggatgagaacttgttaacaaggttgcagaacattaatt 1177
|||||||| | ||||| || ||||||||||||||| | ||||| ||||||||||||||||
Sbjct: 438 caagatgggcatttgtaaacaaggatgagaacttgcttacaagattgcagaacattaatt 497
Query: 1178 tggcattccattttgaggtggagcagca 1205
| | ||||| |||||||| || |||||
Sbjct: 498 tatctttccactttgaggttgaacagca 525
Score = 56.0 bits (28), Expect = 9e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 999 ttatgtgaaagactatgaatttgttgcaatttttgatgctgattttcagcctaccccgga 1058
|||||| || || ||||| ||||| ||||| ||||||||||||||||| ||||| || ||
Sbjct: 319 ttatgttaaggattatgagtttgtggcaatatttgatgctgattttcaacctacaccaga 378
Query: 1059 tttc 1062
||||
Sbjct: 379 tttc 382
>gnl|LJGI|TC62147 similar to UniRef100_A7PME8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1206
Score = 69.9 bits (35), Expect = 6e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 1708 gttccttaccttctctttgagaacaccatgtcagttaccaaattcaatgccatgatctct 1767
||||| || ||||| ||||||||||| ||||||||||| || ||||| |||||| | ||
Sbjct: 341 gttccatatcttctttttgagaacacaatgtcagttacaaagttcaacgccatggtttcg 400
Query: 1768 ggtctcttccagctcggaagtgcatatgagtgggttgttaccaagaa 1814
|| | || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 401 gggttgtttcagctaggaagtgcttatgagtgggttgtgactaagaa 447
>gnl|LJGI|AV407297 homologue to UniRef100_A7PME8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 400
Score = 63.9 bits (32), Expect = 4e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1264 ataaaggctttggaggaatcgggtggttggttggagaggaccaccgtggaagacatggac 1323
|||||||||||||||||||| || || ||| | ||||| ||||| || || |||||||||
Sbjct: 4 ataaaggctttggaggaatccgggggctggctagagagaaccacagttgaggacatggac 63
Query: 1324 attgccgt 1331
||||||||
Sbjct: 64 attgccgt 71