Miyakogusa Predicted Gene

Lj5g3v0335560.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0335560.1 CUFF.52880.1
         (1263 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67764 similar to UniRef100_A9U2H3 Cluster: Predicted ...   434   e-121
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom...   133   3e-30
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome...    78   2e-13

>gnl|LJGI|TC67764 similar to UniRef100_A9U2H3 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (3%)
          Length = 696

 Score =  434 bits (219), Expect = e-121
 Identities = 237/243 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1021 cgcataggacatggaattggtggttatggtgctgctggtggtattagctcctttcaccct 1080
            |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| 
Sbjct: 1    cgcataggacatggaattggtggttatggtgctgctggtggtatcagctcctctcaccca 60

                                                                        
Query: 1081 tttccgaattcaagtttccagggaattctagctggcatgcctggttcatcaacacaatac 1140
            || |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61   ttcccgaatacaagtttccagggaaatctagctggcatgcctggttcatcaacacaatac 120

                                                                        
Query: 1141 cctcctttgccacagaatgttttggaccatgagttccaaagcttctatggaatgggatat 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cctcctttgccacagaatgttttggaccatgagttccaaagcttctatggaatgggatat 180

                                                                        
Query: 1201 gattccaatacagtacttgacaattcgggacctaatgggcggttgaaaacagagttatag 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gattccaatacagtacttgacaattcgggacctaatgggcggttgaaaacagagttatag 240

               
Query: 1261 tat 1263
            |||
Sbjct: 241  tat 243


>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_22, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 526

 Score =  133 bits (67), Expect = 3e-30
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                       
Query: 766 ggtcaagccacaaacagtcacagccttgcagaaagggtaagaagagaaaagattagtgaa 825
           |||||||| ||||| ||||||||||||||||| || || || || |||||||| ||||| 
Sbjct: 131 ggtcaagcaacaaatagtcacagccttgcagagagagtgaggagggaaaagataagtgag 190

                                                                       
Query: 826 agaatgaggttgcttcaagagcttgttccaggatgcaacaagataactggcaaagcagta 885
           || |||| ||| |||||||| ||||| || ||||||| |||| | |||||||| || || 
Sbjct: 191 aggatgaagttccttcaagatcttgtacctggatgcagcaaggtcactggcaaggctgtg 250

                                                                       
Query: 886 atgctggatgagattataaactatgtgcaatcactgcagcaacaggttgagtttttgtcc 945
           ||||| ||||| || || |||||||| || ||||| ||   |||||||||||||||||||
Sbjct: 251 atgctagatgaaatcatcaactatgtacagtcacttcaaagacaggttgagtttttgtcc 310

                      
Query: 946 atgaaacttgc 956
           |||||||||||
Sbjct: 311 atgaaacttgc 321


>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_58, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 1046

 Score = 77.8 bits (39), Expect = 2e-13
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                       
Query: 820 agtgaaagaatgaggttgcttcaagagcttgttccaggatgcaacaagataactggcaaa 879
           |||||||| |||| | |||| ||||| ||||||||||| ||||| ||| | ||||| |||
Sbjct: 135 agtgaaaggatgaagctgctccaagatcttgttccaggttgcaataaggtcactggaaaa 194

                                                                      
Query: 880 gcagtaatgctggatgagattataaactatgtgcaatcactgcagcaacaggttgagtt 938
           ||| | ||||| ||||| |||||||||||||| || ||| ||||||  || ||||||||
Sbjct: 195 gcacttatgcttgatgaaattataaactatgtccagtcattgcagcgtcaagttgagtt 253