Miyakogusa Predicted Gene
- Lj5g3v0324520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0324520.1 tr|H6VM87|H6VM87_BRANA Growth-regulating factor 2
OS=Brassica napus GN=GRF2a1 PE=2 SV=1,40.96,0.0000000000004,seg,NULL;
FAMILY NOT NAMED,NULL; no description,Glutamine-Leucine-Glutamine,
QLQ; WRC,WRC; QLQ,Gluta,CUFF.52873.1
(1893 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043870 similar to UniRef100_A7NUC4 Cluster: Chromosom... 852 0.0
gnl|LJGI|AV427218 homologue to UniRef100_A7PY11 Cluster: Chromos... 62 1e-08
>gnl|LJGI|BP043870 similar to UniRef100_A7NUC4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 546
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1 atggatcttggggtagtgggtttggatgggttggtgggttcagaaacaggatttgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggatcttggggtagtgggtttggatgggttggtgggttcagaaacaggatttgtttct 176
Query: 61 cttgcttcagatcctgaggcaaagcacaagtggtacggatctgggttccttaagcaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cttgcttcagatcctgaggcaaagcacaagtggtacggatctgggttccttaagcaagag 236
Query: 121 agatctgccacaactgaagatgatgacttgagaagctccaaacttgccaagactaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agatctgccacaactgaagatgatgacttgagaagctccaaacttgccaagactaataat 296
Query: 181 gatgacaaagcaatgcagcagtttcagttgcagcagcagaacaagaactcttcttcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gatgacaaagcaatgcagcagtttcagttgcagcagcagaacaagaactcttcttcatca 356
Query: 241 tcactgagatctaatgctactttgttttctgatggccatcaccagcaacacatgctgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcactgagatctaatgctactttgttttctgatggccatcaccagcaacacatgctgagc 416
Query: 301 ttctcttctccaaagcttgaaacttattcactagacaagaacaacccaaatgccacattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttctcttctccaaagcttgaaacttattcactagacaagaacaacccaaatgccacattg 476
Query: 361 tcttattcttatcaccctttgtctagttacagcagaaacacaggttacagttcaggaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcttattcttatcaccctttgtctagttacagcagaaacacaggttacagttcaggaagc 536
Query: 421 atgcatgggg 430
||||||||||
Sbjct: 537 atgcatgggg 546
>gnl|LJGI|AV427218 homologue to UniRef100_A7PY11 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 203
Score = 61.9 bits (31), Expect = 1e-08
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 727 gatcagaagtactgcgagcggcacatgaacagaggacgccatcgttcaagaaagcctgtg 786
|||||||||||||| || || |||||| | ||||| || ||||||||||||||||||||
Sbjct: 17 gatcagaagtactgtgaacgccacatgcatagaggtcgtaatcgttcaagaaagcctgtg 76
Query: 787 gaa 789
|||
Sbjct: 77 gaa 79