Miyakogusa Predicted Gene

Lj5g3v0323470.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0323470.1 Non Chatacterized Hit- tr|G7L7X2|G7L7X2_MEDTR
Transporter, putative OS=Medicago truncatula
GN=MTR_8g,78.52,0,Mem_trans,Auxin efflux carrier; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.52868.1
         (1218 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80242 weakly similar to UniRef100_A7QSR7 Cluster: Chr...  1001   0.0  
gnl|LJGI|GO024348 weakly similar to UniRef100_A7QSR6 Cluster: Ch...   496   e-139

>gnl|LJGI|TC80242 weakly similar to UniRef100_A7QSR7 Cluster: Chromosome chr4
            scaffold_162, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (39%)
          Length = 610

 Score = 1001 bits (505), Expect = 0.0
 Identities = 505/505 (100%)
 Strand = Plus / Plus

                                                                        
Query: 714  ttttggacacgttttcgcgccatcaaccatcggagcgattactggctttagcattggtgt 773
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttttggacacgttttcgcgccatcaaccatcggagcgattactggctttagcattggtgt 60

                                                                        
Query: 774  aatccccccaatacgtaatttcctggttggcaacaatgctccacttcgtgtggttgaaga 833
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aatccccccaatacgtaatttcctggttggcaacaatgctccacttcgtgtggttgaaga 120

                                                                        
Query: 834  ctctgcatccatgttaggtgatgcagccattccaacagtcacacttatattgggtgcaaa 893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctctgcatccatgttaggtgatgcagccattccaacagtcacacttatattgggtgcaaa 180

                                                                        
Query: 894  tctccttggaggtttgaagggaacaagtactccactttggaccattgttggaattatatt 953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tctccttggaggtttgaagggaacaagtactccactttggaccattgttggaattatatt 240

                                                                        
Query: 954  agtcagatatattttcctgccactattgggtgttgtaattgtaaaaggggcagtaaaatt 1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  agtcagatatattttcctgccactattgggtgttgtaattgtaaaaggggcagtaaaatt 300

                                                                        
Query: 1014 tggcttggtgccatcagatcccttatatcagtttgtgcttctacttcaatatgcattgcc 1073
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tggcttggtgccatcagatcccttatatcagtttgtgcttctacttcaatatgcattgcc 360

                                                                        
Query: 1074 tccagctatgaatataggaactatggctcaattgtttggaactggccaaagtgaattctc 1133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tccagctatgaatataggaactatggctcaattgtttggaactggccaaagtgaattctc 420

                                                                        
Query: 1134 ggttatcatgctatggtcatatgctctggcgtcaattgcagtaaccctttggtccaccta 1193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ggttatcatgctatggtcatatgctctggcgtcaattgcagtaaccctttggtccaccta 480

                                     
Query: 1194 tttcatgtggctagttgcttgatta 1218
            |||||||||||||||||||||||||
Sbjct: 481  tttcatgtggctagttgcttgatta 505


>gnl|LJGI|GO024348 weakly similar to UniRef100_A7QSR6 Cluster: Chromosome chr4
           scaffold_162, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (20%)
          Length = 552

 Score =  496 bits (250), Expect = e-139
 Identities = 253/254 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggtttctagaactcttgtctgttgcctcttacccggtgatgaaagtgttactcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atggggtttctagaactcttgtctgttgcctcttacccggtgatgaaagtgttactcatt 358

                                                                       
Query: 61  accgcgattggtgtgtttcttgcattggataacatagatgttctgggagcagatgcaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 accgcgattggtgtgtttcttgcattggataacatagatgttctgggagcagatgcaagg 418

                                                                       
Query: 121 aagaaagtgaacaatcttgtgttttatgtgtttaatccatccctggtgggtagcaatttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aagaaagtgaacaatcttgtgttttatgtgtttaatccatccctggtgggtagcaatttg 478

                                                                       
Query: 181 gccaaaaccttaacctctgagaatgttctttcattgtggttcatgcctgtcaatgttatt 240
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 479 gccaaaaccttaacctctgagaatgttcattcattgtggttcatgcctgtcaatgttatt 538

                         
Query: 241 gtcacattcatatt 254
           ||||||||||||||
Sbjct: 539 gtcacattcatatt 552