Miyakogusa Predicted Gene
- Lj5g3v0322410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0322410.1 Non Chatacterized Hit- tr|K3ZHL7|K3ZHL7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026069,30.09,0.000000000003,coiled-coil,NULL;
seg,NULL,CUFF.52862.1
(1314 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74535 weakly similar to UniRef100_A7NUC1 Cluster: Chr... 775 0.0
gnl|LJGI|BP056317 weakly similar to UniRef100_A7NUC1 Cluster: Ch... 714 0.0
gnl|LJGI|DC599119 similar to UniRef100_A7NUC1 Cluster: Chromosom... 420 e-117
>gnl|LJGI|TC74535 weakly similar to UniRef100_A7NUC1 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 571
Score = 775 bits (391), Expect = 0.0
Identities = 457/479 (95%)
Strand = Plus / Plus
Query: 836 tccatgaacagaagaaagactttcatgagaggatgaataatataattacatcactggaga 895
|||||||||| ||||||| ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 1 tccatgaacaacagaaagagtttcacgagaggatgaatattataatgacatcactggagt 60
Query: 896 tatcagagaactcaacaacaagagagcaagagacaaattcttcgtgcagctgtgaataca 955
||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| |||||
Sbjct: 61 tatcagagaactcgacaacaacagagcaagagaggaatccttcgtgcagctgtggataca 120
Query: 956 aggtctctgatttgggaggagaaactgcttactcaaagaatgatttaactgaaagatgtg 1015
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggctctgatttgggaggagaaactgcttactcaaagaatgatttaactgaaagatgtg 180
Query: 1016 aaagcctagaaagggagttactacttttgaaggatgaaagagactctttgctgctgaagt 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagcctagaaagggagttactacttttgaaggatgaaagagactctttgctgctgaagt 240
Query: 1076 tctctgaatcatctgagaaacttgcaatggtttcaaggcaaaaggaaaaggctttgaaag 1135
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 241 tctctgaatcatctgagaaacttgcaacggtttcaaggcaaaaggaaaaggctttgcaag 300
Query: 1136 atttatatactgaagttcagagaagggaaaatctagaaggggaggttaagcagttttctg 1195
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 atttaaatactgaagttcagagaagggaaaatctagaaggggaggttaagaagttttctg 360
Query: 1196 cagctttcgcctgtcgtcagaaatcactcatttcattccagagtgaagttaagaccaaat 1255
||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 361 cagcttttgcctgtcgtcagaaatcactcatttccttccatagtgaagttaagaccaaat 420
Query: 1256 ttgagaaattgagagctcagacaccaattccagtgcccaattcttttggttattaggac 1314
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 ttgagaaattgagagctcagacaccaattccagtgctcaattcttttggttattaggac 479
>gnl|LJGI|BP056317 weakly similar to UniRef100_A7NUC1 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 493
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Minus
Query: 955 aaggtctctgatttgggaggagaaactgcttactcaaagaatgatttaactgaaagatgt 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaggtctctgatttgggaggagaaactgcttactcaaagaatgatttaactgaaagatgt 384
Query: 1015 gaaagcctagaaagggagttactacttttgaaggatgaaagagactctttgctgctgaag 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaagcctagaaagggagttactacttttgaaggatgaaagagactctttgctgctgaag 324
Query: 1075 ttctctgaatcatctgagaaacttgcaatggtttcaaggcaaaaggaaaaggctttgaaa 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttctctgaatcatctgagaaacttgcaatggtttcaaggcaaaaggaaaaggctttgaaa 264
Query: 1135 gatttatatactgaagttcagagaagggaaaatctagaaggggaggttaagcagttttct 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gatttatatactgaagttcagagaagggaaaatctagaaggggaggttaagcagttttct 204
Query: 1195 gcagctttcgcctgtcgtcagaaatcactcatttcattccagagtgaagttaagaccaaa 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcagctttcgcctgtcgtcagaaatcactcatttcattccagagtgaagttaagaccaaa 144
Query: 1255 tttgagaaattgagagctcagacaccaattccagtgcccaattcttttggttattaggac 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tttgagaaattgagagctcagacaccaattccagtgcccaattcttttggttattaggac 84
>gnl|LJGI|DC599119 similar to UniRef100_A7NUC1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 260
Score = 420 bits (212), Expect = e-117
Identities = 250/260 (96%), Gaps = 2/260 (0%)
Strand = Plus / Plus
Query: 148 ggatctttgagtcacagatttacagaagagttcagtgaaattaatagtacatcacaagga 207
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatctttgagtcacagatttacggaagagttcagtgaaattaatagtacatcacaagga 60
Query: 208 gatatttttagatctccctgtttgaagacacttcccagtacttttgttgccaggcgacca 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatatttttagatctccctgtttgaagacacttcccagtacttttgttgccaggcgacca 120
Query: 268 aagaattcaactttgc-cagattttagccctccaccagttgctttcagcaatgtggctga 326
|||||||||||||||| || |||||||||| || |||||||||||||||||||||||
Sbjct: 121 aagaattcaactttgcggggaggttagccctccccctgttgctttcagcaatgtggctga 180
Query: 327 tgaagatatgtggttg-aaaatgaacaatggttacgttgcggatcttgattcacttcaaa 385
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaagatatgtggttgaaaaatgaacaatggttacgttgcggatcttgattcacttcaaa 240
Query: 386 ctactccctttcgaaaagtt 405
|||||| |||||||||||||
Sbjct: 241 ctactcgctttcgaaaagtt 260