Miyakogusa Predicted Gene
- Lj5g3v0321370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0321370.1 tr|F6H0I5|F6H0I5_VITVI Protein translocase
subunit SecA OS=Vitis vinifera GN=secA PE=3 SV=1,86.14,0,secA:
preprotein translocase, SecA subunit,Protein translocase subunit SecA;
seg,NULL; P-loop contai,CUFF.52859.1
(3132 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS349004 homologue to UniRef100_A7NVI1 Cluster: Preprot... 1457 0.0
gnl|LJGI|TC70691 similar to UniRef100_Q9XI14 Cluster: Preprotein... 1312 0.0
gnl|LJGI|BW606502 weakly similar to UniRef100_Q9XI14 Cluster: Pr... 733 0.0
>gnl|LJGI|FS349004 homologue to UniRef100_A7NVI1 Cluster: Preprotein translocase secA
subunit; n=1; Vitis vinifera|Rep: Preprotein translocase
secA subunit - Vitis vinifera (Grape), partial (23%)
Length = 735
Score = 1457 bits (735), Expect = 0.0
Identities = 735/735 (100%)
Strand = Plus / Minus
Query: 1058 ctagtgacctttgggatgaaaatgatccctgggctagatttgtgatgaatgctttaaaag 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctagtgacctttgggatgaaaatgatccctgggctagatttgtgatgaatgctttaaaag 676
Query: 1118 ctaaggaattctatcgccgagatgtgcaatacattgtcagagatggaaaggctttaatta 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ctaaggaattctatcgccgagatgtgcaatacattgtcagagatggaaaggctttaatta 616
Query: 1178 tcaatgagctgacaggaagagttgaagagaaaaggagatggtccgagggaattcaccagg 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcaatgagctgacaggaagagttgaagagaaaaggagatggtccgagggaattcaccagg 556
Query: 1238 ctgtggaggcaaaggaaggtttgaagattcaggcagattctgttgttgtggcacagatca 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ctgtggaggcaaaggaaggtttgaagattcaggcagattctgttgttgtggcacagatca 496
Query: 1298 cataccagtcattgttcaagctctatcctaaattgtcaggaatgaccggaactgcaaaaa 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cataccagtcattgttcaagctctatcctaaattgtcaggaatgaccggaactgcaaaaa 436
Query: 1358 cagaagagaaagagttcttgaaaatgttccagatgccagtcattgaagtgcccacaaatc 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cagaagagaaagagttcttgaaaatgttccagatgccagtcattgaagtgcccacaaatc 376
Query: 1418 ttcctaatattcggaaagatttgcctattcaagcatttgctactcttcgtgggaaatggg 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcctaatattcggaaagatttgcctattcaagcatttgctactcttcgtgggaaatggg 316
Query: 1478 agcaagttcgtcaagaagttgaatatatgttcagacaaggtcgtcctgtcttagttggga 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agcaagttcgtcaagaagttgaatatatgttcagacaaggtcgtcctgtcttagttggga 256
Query: 1538 caactagtgtagaaaattctgaacttttggctggtttgcttagggaatggaatattccct 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 caactagtgtagaaaattctgaacttttggctggtttgcttagggaatggaatattccct 196
Query: 1598 ataatgttctgaatgctcgaccgaagtatgctgcaagagaagctgaaattgttgcacagg 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ataatgttctgaatgctcgaccgaagtatgctgcaagagaagctgaaattgttgcacagg 136
Query: 1658 cagggcggaaacatgccattaccctttctactaatatggcaggcaggggaacagatataa 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cagggcggaaacatgccattaccctttctactaatatggcaggcaggggaacagatataa 76
Query: 1718 tccttggaggaaatccaaaaatgcttgccagagaaattatagaggatagcatacttccat 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tccttggaggaaatccaaaaatgcttgccagagaaattatagaggatagcatacttccat 16
Query: 1778 ttttgacgcgagagg 1792
|||||||||||||||
Sbjct: 15 ttttgacgcgagagg 1
>gnl|LJGI|TC70691 similar to UniRef100_Q9XI14 Cluster: Preprotein translocase secA
subunit; n=1; Arabidopsis thaliana|Rep: Preprotein
translocase secA subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (16%)
Length = 755
Score = 1312 bits (662), Expect = 0.0
Identities = 665/666 (99%)
Strand = Plus / Plus
Query: 1 atgctaagctgcaccaaccacccttccttcatggcagcgctctcattcccaccacccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgctaagctgcaccaaccacccttccttcatggcagcgctctcattcccaccacccttc 149
Query: 61 ttcgccgttcagacaaccgcttcgacttcaacttcaagctcaactcacgccaactccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ttcgccgttcagacaaccgcttcgacttcaacttcaagctcaactcacgccaactccttc 209
Query: 121 ttcattcgaccctctcatccccttcctccctggcctcgcttgcgacgccgccgtcgcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttcattcgaccctctcatccccttcctccctggcctcgcttgcgacgccgccgtcgcgct 269
Query: 181 cccttattcgtcgccgccgcttccgtgaaggaaaatctcggtcgcgctcgaaagactctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cccttattcgtcgccgccgcttccgtgaaggaaaatctcggtcgcgctcgaaagactctc 329
Query: 241 actgacttcacaatcttgaactactgggtcgttcgtgactactaccgccttgttagctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 actgacttcacaatcttgaactactgggtcgttcgtgactactaccgccttgttagctcc 389
Query: 301 gtcaacgccttcgagccgcggattcagttgctgtcggatgaagagctggccgctaaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtcaacgccttcgagccgcggattcagttgctgtcggatgaagagctggccgctaaaacc 449
Query: 361 ccggagtttcgccgccggctcgagcgaggggagacccttgcggatatccaagctgaggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccggagtttcgccgccggctcgagcgaggggagacccttgcggatatccaagctgaggcg 509
Query: 421 tttgctgttgttcgtgaagctgcgagaagaaagcttggaatgcgccattttgatgttcag 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttgctgtggttcgtgaagctgcgagaagaaagcttggaatgcgccattttgatgttcag 569
Query: 481 attattgggggagctgtgctgcatgatgggtccattgctgagatgaaaacaggggaggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 attattgggggagctgtgctgcatgatgggtccattgctgagatgaaaacaggggaggga 629
Query: 541 aaaaccttggtttccacactggcagcatatcttaatgccctgaccgctgagggtgtacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaaaccttggtttccacactggcagcatatcttaatgccctgaccgctgagggtgtacat 689
Query: 601 attgtaactgtcaatgattatttagctcaacgggatgctgaatggatggggcgtgttcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 attgtaactgtcaatgattatttagctcaacgggatgctgaatggatggggcgtgttcac 749
Query: 661 cgtttc 666
||||||
Sbjct: 750 cgtttc 755
>gnl|LJGI|BW606502 weakly similar to UniRef100_Q9XI14 Cluster: Preprotein translocase
secA subunit; n=1; Arabidopsis thaliana|Rep: Preprotein
translocase secA subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (6%)
Length = 533
Score = 733 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Plus
Query: 1 atgctaagctgcaccaaccacccttccttcatggcagcgctctcattcccaccacccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgctaagctgcaccaaccacccttccttcatggcagcgctctcattcccaccacccttc 219
Query: 61 ttcgccgttcagacaaccgcttcgacttcaacttcaagctcaactcacgccaactccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttcgccgttcagacaaccgcttcgacttcaacttcaagctcaactcacgccaactccttc 279
Query: 121 ttcattcgaccctctcatccccttcctccctggcctcgcttgcgacgccgccgtcgcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttcattcgaccctctcatccccttcctccctggcctcgcttgcgacgccgccgtcgcgct 339
Query: 181 cccttattcgtcgccgccgcttccgtgaaggaaaatctcggtcgcgctcgaaagactctc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cccttattcgccgccgccgcttccgtgaaggaaaatctcggtcgcgctcgaaagactctc 399
Query: 241 actgacttcacaatcttgaactactgggtcgttcgtgactactaccgccttgttagctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 actgacttcacaatcttgaactactgggtcgttcgtgactactaccgccttgttagctcc 459
Query: 301 gtcaacgccttcgagccgcggattcagttgctgtcggatgaagagctggccgctaaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gtcaacgccttcgagccgcggattcagttgctgtcggatgaagagctggccgctaaaacc 519
Query: 361 ccggagtttcgccg 374
||||||||||||||
Sbjct: 520 ccggagtttcgccg 533