Miyakogusa Predicted Gene
- Lj5g3v0310180.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0310180.2 Non Chatacterized Hit- tr|I1M8T9|I1M8T9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.63,0,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain;
Tetratricopepti,CUFF.52846.2
(2166 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS354559 similar to UniRef100_A7NU93 Cluster: Chromosom... 1104 0.0
gnl|LJGI|TC78576 similar to UniRef100_A7NU93 Cluster: Chromosome... 884 0.0
gnl|LJGI|BP054586 similar to UniRef100_A7NU93 Cluster: Chromosom... 167 4e-40
gnl|LJGI|TC73740 homologue to UniRef100_Q5UNT5 Cluster: Uncharac... 56 1e-06
>gnl|LJGI|FS354559 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 641
Score = 1104 bits (557), Expect = 0.0
Identities = 560/561 (99%)
Strand = Plus / Minus
Query: 1145 tttcccgggaagttatcgatctagcccagcatcaaaatgagcactttttgagccaaggga 1204
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tttcccaggaagttatcgatctagcccagcatcaaaatgagcactttttgagccaaggga 582
Query: 1205 gaaaatttcttggtatctgccatggagcagcggctagaatatctgtactggattctgaaa 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gaaaatttcttggtatctgccatggagcagcggctagaatatctgtactggattctgaaa 522
Query: 1265 gagtttcatttcaaagagagtctttaaactttctaaacaaagctgttttaaacggaaatg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gagtttcatttcaaagagagtctttaaactttctaaacaaagctgttttaaacggaaatg 462
Query: 1325 acgaccctgaagcaatattcagccttggactggaaaatgcagttcaaaggaatctaaatg 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acgaccctgaagcaatattcagccttggactggaaaatgcagttcaaaggaatctaaatg 402
Query: 1385 cagctcatgacaacatgatgatgtactcagacatgatggttggaagctctagaagaggtt 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cagctcatgacaacatgatgatgtactcagacatgatggttggaagctctagaagaggtt 342
Query: 1445 ggaagctgttagcacttatagtatctgcacagcagaggtttaaggatgcagaaactttag 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggaagctgttagcacttatagtatctgcacagcagaggtttaaggatgcagaaactttag 282
Query: 1505 ttgattttgctttagatgagtctgggagaatagatcagttagaactactaagattgaaag 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttgattttgctttagatgagtctgggagaatagatcagttagaactactaagattgaaag 222
Query: 1565 ctgtgcttcaaatttctcagcagcaacccaaacaagcaatagagacctacagaatcttgc 1624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ctgtgcttcaaatttctcagcagcaacccaaacaagcaatagagacctacagaatcttgc 162
Query: 1625 tagcagtaatacaagcaaaaaaggaggcttggcttcaagctaaggaggagctccatcaag 1684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tagcagtaatacaagcaaaaaaggaggcttggcttcaagctaaggaggagctccatcaag 102
Query: 1685 caaaaatattcagggatgagg 1705
|||||||||||||||||||||
Sbjct: 101 caaaaatattcagggatgagg 81
>gnl|LJGI|TC78576 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 741
Score = 884 bits (446), Expect = 0.0
Identities = 456/458 (99%), Gaps = 1/458 (0%)
Strand = Plus / Plus
Query: 1 atgttgtgtgcttgctccggggagcaattcaaatttgaagaggcgccgcagtcaccggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atgttgtgtgcttgctccggggagcaattcaaatttgaagaggcgccgcagtcaccggaa 343
Query: 61 tccctggcaacaagggatttctctgctagtggactatcttcaaattcaaggacaggggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tccctggcaacaagggatttctctgctagtggactatcttcaaattcaaggacaggggat 403
Query: 121 tgtgaatccaaattcagtgag-gcccaagtagaagatgctgaatctactctaaaagaagc 179
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 404 tgtgaatccaaattcagtgagtgcccaagtaaaagatgctgaatctactctaaaagaagc 463
Query: 180 tctctcattaaactatgaggaagctcgagctttgctggggaggcttgaatatcaaagagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tctctcattaaactatgaggaagctcgagctttgctggggaggcttgaatatcaaagagg 523
Query: 240 gaactttgatgctgcccttcaagtgtttcaaggtatagacatcaaggctataagcccaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaactttgatgctgcccttcaagtgtttcaaggtatagacatcaaggctataagcccaag 583
Query: 300 gatgattagggctataactgaaagaaccaagcaaagaaaaccgcgttcaaaggccgataa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gatgattagggctataactgaaagaaccaagcaaagaaaaccgcgttcaaaggccgataa 643
Query: 360 tgtgcttccaaatttgatgtcaatgcattcagtaagcttgcttcttgaggcaatttatct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgtgcttccaaatttgatgtcaatgcattcagtaagcttgcttcttgaggcaatttatct 703
Query: 420 taaagccaaatccttagaggaacttgggcaatacactg 457
||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taaagccaaatccttagaggaacttgggcaatacactg 741
>gnl|LJGI|BP054586 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 340
Score = 167 bits (84), Expect = 4e-40
Identities = 159/184 (86%)
Strand = Plus / Minus
Query: 1983 atcacttccagttgcaagaagtttcttgatgaatgctttgagattggaacccacaaacca 2042
|||||||||| |||||||||| || ||||||||||||||| | | ||||| ||||||
Sbjct: 317 atcacttccaattgcaagaagctttttgatgaatgctttgcggatagaaccggaaaacca 258
Query: 2043 tgatgcttggttcaaactcggattggtttcaaaaatggaaggttcattacagcaagctgc 2102
||||| |||||||| || |||||||||||||||| |||||||||||||||||||| ||
Sbjct: 257 tgatgtgtggttcaaccttggattggtttcaaaaagcgaaggttcattacagcaagcagc 198
Query: 2103 agattgctttcaagcttcacatgagctgaagctatcagctccagtgcaaaaatttgagtg 2162
||||| |||||||||| || |||| || ||||| || ||||||||||||||||||||||
Sbjct: 197 agattactttcaagctgcatatgaactaaagctttccgctccagtgcaaaaatttgagta 138
Query: 2163 attg 2166
||||
Sbjct: 137 attg 134
>gnl|LJGI|TC73740 homologue to UniRef100_Q5UNT5 Cluster: Uncharacterized protein
R681; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized protein R681 - Acanthamoeba polyphaga
mimivirus (APMV), partial (8%)
Length = 488
Score = 56.0 bits (28), Expect = 1e-06
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 atgttgtgtgcttgctccggggagcaattcaa 32
|||||||||||||||||||||||||| |||||
Sbjct: 452 atgttgtgtgcttgctccggggagcagttcaa 483