Miyakogusa Predicted Gene
- Lj5g3v0308860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308860.1 tr|D7MV54|D7MV54_ARALL Armadillo/beta-catenin
repeat family protein OS=Arabidopsis lyrata subsp.
lyr,34.39,0.0000000005,ARM_REPEAT,Armadillo; no
description,Armadillo-like helical; Arm,Armadillo; ANKYRIN AND
ARMADILLO RE,CUFF.52838.1
(1065 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72797 similar to UniRef100_Q944I3 Cluster: AT3g01400/... 1491 0.0
gnl|LJGI|BW601522 similar to UniRef100_Q944I3 Cluster: AT3g01400... 589 e-167
gnl|LJGI|BW620769 similar to UniRef100_Q944I3 Cluster: AT3g01400... 488 e-137
gnl|LJGI|TC77816 170 1e-41
>gnl|LJGI|TC72797 similar to UniRef100_Q944I3 Cluster: AT3g01400/T13O15_4; n=1;
Arabidopsis thaliana|Rep: AT3g01400/T13O15_4 -
Arabidopsis thaliana (Mouse-ear cress), partial (64%)
Length = 882
Score = 1491 bits (752), Expect = 0.0
Identities = 752/752 (100%)
Strand = Plus / Plus
Query: 1 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 190
Query: 61 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 250
Query: 121 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 310
Query: 181 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 370
Query: 241 gccatggaaatccgattactcgctaagaacaagcctgagaatcgcatcaaaatcgccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gccatggaaatccgattactcgctaagaacaagcctgagaatcgcatcaaaatcgccaaa 430
Query: 301 gccggcgcaatcaaaccgctaatttcgcttatttcctcgcaagacctccagcttcaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gccggcgcaatcaaaccgctaatttcgcttatttcctcgcaagacctccagcttcaggaa 490
Query: 361 tacggcgtcaccgcgattctcaacctctccctctgcgacgagaacaaggagttgatagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tacggcgtcaccgcgattctcaacctctccctctgcgacgagaacaaggagttgatagct 550
Query: 421 tcctccggagcgattaagcctctggtgagagcgttgaaagcagggacgccgacggcgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcctccggagcgattaagcctctggtgagagcgttgaaagcagggacgccgacggcgaag 610
Query: 481 gagaacgcggcgtgcgcgttgctccgcctctcacaggcggaggagagcaaggcggcgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gagaacgcggcgtgcgcgttgctccgcctctcacaggcggaggagagcaaggcggcgatt 670
Query: 541 gggaggtccggcgccattccgctactggtgagcctcctgcaaaccggcggtatccgcggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gggaggtccggcgccattccgctactggtgagcctcctgcaaaccggcggtatccgcggg 730
Query: 601 aagaaggacgcgtcgacggcgctgtactcgctctgctcggtgagggagaacaagatcagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aagaaggacgcgtcgacggcgctgtactcgctctgctcggtgagggagaacaagatcagg 790
Query: 661 gcggtgaaggcggggatcatgaaggttctggtggagctgatggcggactttgagtcaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gcggtgaaggcggggatcatgaaggttctggtggagctgatggcggactttgagtcaaac 850
Query: 721 atggtggataagtcagcgtacgtggtgagcgt 752
||||||||||||||||||||||||||||||||
Sbjct: 851 atggtggataagtcagcgtacgtggtgagcgt 882
>gnl|LJGI|BW601522 similar to UniRef100_Q944I3 Cluster: AT3g01400/T13O15_4; n=1;
Arabidopsis thaliana|Rep: AT3g01400/T13O15_4 -
Arabidopsis thaliana (Mouse-ear cress), partial (21%)
Length = 464
Score = 589 bits (297), Expect = e-167
Identities = 297/297 (100%)
Strand = Plus / Plus
Query: 1 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 227
Query: 61 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 287
Query: 121 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 347
Query: 181 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 407
Query: 241 gccatggaaatccgattactcgctaagaacaagcctgagaatcgcatcaaaatcgcc 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccatggaaatccgattactcgctaagaacaagcctgagaatcgcatcaaaatcgcc 464
>gnl|LJGI|BW620769 similar to UniRef100_Q944I3 Cluster: AT3g01400/T13O15_4; n=1;
Arabidopsis thaliana|Rep: AT3g01400/T13O15_4 -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 374
Score = 488 bits (246), Expect = e-137
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgggaaccgagagctacacttacatgggtcgcagcttcagcgcgctatccatcaacgac 188
Query: 61 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gattcatcttcctccgctttcagcgactgcaacagcgacagatctggcgaattcgccacc 248
Query: 121 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcttcttcccaaacccgccgccgtctcctcatcgcttgcgcctccgagaattccgatgac 308
Query: 181 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctcatcctgcagcttgtcgacgatctccaatcctcctccgtcgacgatcagaaacaagcc 368
Query: 241 gccatg 246
||||||
Sbjct: 369 gccatg 374
>gnl|LJGI|TC77816
Length = 505
Score = 170 bits (86), Expect = 1e-41
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 980 aggcggagaaactgattgagctgctgcggcaaccgagatctgggagcgccgctgcacgta 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aggcggagaaactgattgagctgctgcggcaaccgagatctgggagcgccgctgcacgta 314
Query: 1040 cggcggcggaagtggtggcatgaatt 1065
||||||||||||||||||||||||||
Sbjct: 315 cggcggcggaagtggtggcatgaatt 340
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 956 acggcaccaatcgcgccaagcaaaagg 982
|||||||||||||||||||||||||||
Sbjct: 1 acggcaccaatcgcgccaagcaaaagg 27