Miyakogusa Predicted Gene
- Lj5g3v0308840.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308840.2 CUFF.52825.2
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO037108 weakly similar to UniRef100_Q5MD14 Cluster: Po... 1189 0.0
gnl|LJGI|GO025581 similar to UniRef100_A7PLQ4 Cluster: Chromosom... 660 0.0
gnl|LJGI|BW597967 105 3e-22
>gnl|LJGI|GO037108 weakly similar to UniRef100_Q5MD14 Cluster: Porin-like protein;
n=1; Brassica napus|Rep: Porin-like protein - Brassica
napus (Rape), partial (33%)
Length = 648
Score = 1189 bits (600), Expect = 0.0
Identities = 609/612 (99%)
Strand = Plus / Plus
Query: 1 atgacacccaaaggcaaaggaggacctgtacccttctccgatatcgtcaagcgagaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atgacacccaaaggcaaaggaggacctgtacccttctccgatatcgtcaagcgagaaaga 90
Query: 61 gacattctcaacaaagattacaactccgatcatagtttaaccatctcttcctccaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gacattctcaacaaagattacaactccgatcatagtttaaccatctcttcctccaccacc 150
Query: 121 tctggtctcaacttgagctcaacgttggtgaagagtagaggactctcctccggggctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tctggtctcaacttgagctcaacgttggtgaagagtagaggactctcctccggggctgtg 210
Query: 181 gctgcggcgtttaagcacaacaacaagacacttcatttcaaacttgacactgattcaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gctgcggcgtttaagcacaacaacaagacacttcatttcaaacttgacactgattcaact 270
Query: 241 gtgctgaccacatttactatagccaatgttgtgccttcaacaaaaaccgttgcttctata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtgctgaccacatttactatagccaatgttgtgccttcaacaaaaaccgttgcttctata 330
Query: 301 cgactaccttattatgactccggcaagattgcggttcagtatcttcatcatcatgtggct 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cgactaccttattataactccggcaagattgcggttcagtatcttcatcatcatgtggct 390
Query: 361 ttaactggtgctgttggtttgaaccgatcccctgatgtcgatttttctgcgactattggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttaactggtgctgttggtttgaaccgatcccctgatgtcgatttttctgcgactattggc 450
Query: 421 actcccagcattgcttttggagctgaaaccagctactccacaagtgctggcaagtttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 actcccagcattgcttttggagctgaaaccagctactccacaagtgctggcaagtttaca 510
Query: 481 aagtacaatgctggcttatgcttccaaatgccaagttccaatgcttcagttattctagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aagtacaatgctggcttatgcttccaaatgccaagttccaatgcttcagttattctagct 570
Query: 541 gataagggagactctatgaaggtgtcgtacttgcgggagctagaaagattgaatggggga 600
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gataaaggagactctatgaaagtgtcgtacttgcgggagctagaaagattgaatggggga 630
Query: 601 gctattgtggga 612
||||||||||||
Sbjct: 631 gctattgtggga 642
>gnl|LJGI|GO025581 similar to UniRef100_A7PLQ4 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 668
Score = 660 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Plus
Query: 276 ttcaacaaaaaccgttgcttctatacgactaccttattatgactccggcaagattgcggt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcaacaaaaaccgttgcttctatacgactaccttattatgactccggcaagattgcggt 311
Query: 336 tcagtatcttcatcatcatgtggctttaactggtgctgttggtttgaaccgatcccctga 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcagtatcttcatcatcatgtggctttaactggtgctgttggtttgaaccgatcccctga 371
Query: 396 tgtcgatttttctgcgactattggcactcccagcattgcttttggagctgaaaccagcta 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtcgatttttctgcgactattggcactcccagcattgcttttggagctgaaaccagcta 431
Query: 456 ctccacaagtgctggcaagtttacaaagtacaatgctggcttatgcttccaaatgccaag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctccacaagtgctggcaagtttacaaagtacaatgctggcttatgcttccaaatgccaag 491
Query: 516 ttccaatgcttcagttattctagctgataagggagactctatgaaggtgtcgtacttgcg 575
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttccaatgctccagttattctagctgataagggagactctatgaaggtgtcgtacttgcg 551
Query: 576 ggagctagaaagattgaatgggggagctattgtggga 612
|||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggagctagaaagattgaatgggggagctattgtggga 588
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 1 atgacacccaaaggcaaaggaggacctgtacccttctccgatatcgtcaagcgagaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atgacacccaaaggcaaaggaggacctgtacccttctccgatatcgtcaagcgagaaaga 78
Query: 61 gacattctcaacaaagattacaactccgatcatagtttaaccatctcttcctccaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gacattctcaacaaagattacaactccgatcatagtttaaccatctcttcctccaccacc 138
Query: 121 tctggtctcaacttgagctcaacgttggtgaagagtagaggactctcctccggggctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tctggtctcaacttgagctcaacgttggtgaagagtagaggactctcctccggggctgtg 198
Query: 181 gctgcggcgtttaagcacaacaacaagacacttcatttcaaacttgacactgattcaac 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gctgcggcgtttaagcacaacaacaagacacttcatttcaaacttgacactgattcaac 257
>gnl|LJGI|BW597967
Length = 466
Score = 105 bits (53), Expect = 3e-22
Identities = 309/385 (80%), Gaps = 7/385 (1%)
Strand = Plus / Plus
Query: 134 tgagctcaacgttggtgaagagtagaggactctcctccggggctgtggctgcggcgttta 193
||||||| |||||||||||||||| |||||| ||||||||||||| |||||| |||||
Sbjct: 83 tgagctcgacgttggtgaagagtataggactgccctccggggctgtagctgcgctgttta 142
Query: 194 agcacaacaacaagacacttcatttcaaacttgacactgattcaactgtgctgaccacat 253
| || |||||| | ||||||||| |||| |||| ||||||||||| |||||||| ||
Sbjct: 143 aacaaaacaaccacacacttcatgacaaaggtgactgtgattcaactgggctgaccagat 202
Query: 254 ttactatagccaatgttgtgccttcaacaaaaaccgttgcttctatacgactaccttatt 313
|| | | |||||| |||| |||||| ||||| ||| ||||| |||||||| ||||
Sbjct: 203 gaaccagaaccaatggtgtgacttcaagaaaaagcgtggcttcgtggcgactaccgtatt 262
Query: 314 atgactccggcaagattgcggttcagtatcttcatcatcatgtggct-ttaactg-gtgc 371
| ||||| || |||| || || || | | |||||||| ||||||| |||| || |||
Sbjct: 263 agcactcctgccagatggcagtgcatgaacgtcatcatcctgtggctattaaatgtctgc 322
Query: 372 tg-ttggtt-tga-accgatcccctgatgtcgatttttctgc-gactattggcactccca 427
| |||||| ||| ||||||||||||||||||||| || || |||| | ||||||||
Sbjct: 323 agcttggttatgatgccgatcccctgatgtcgatttatcggcacactagggacactccca 382
Query: 428 gcattgcttttggagctgaaaccagctactccacaagtgctggcaagtttacaaagtaca 487
|||| ||||| |||||||||| | ||||||| ||||||||||| |||||||||||
Sbjct: 383 gcatcgctttcggagctgaaagtctcaactccac-ggtgctggcaagcttacaaagtacc 441
Query: 488 atgctggcttatgcttccaaatgcc 512
| |||||| ||||||||| ||||||
Sbjct: 442 aggctggcatatgcttccgaatgcc 466