Miyakogusa Predicted Gene
- Lj5g3v0308810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308810.1 Non Chatacterized Hit- tr|B8LS03|B8LS03_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,25.19,1e-18,F-box,F-box domain, cyclin-like; no description,NULL; no
description,Kelch-type beta propeller; Kelc,CUFF.52822.1
(1135 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70387 similar to UniRef100_A7NU91 Cluster: Chromosome... 1746 0.0
gnl|LJGI|BW629212 weakly similar to UniRef100_A9SVS4 Cluster: Pr... 248 6e-65
gnl|LJGI|GO023636 similar to UniRef100_Q9HFU1 Cluster: Ras2; n=1... 54 2e-06
>gnl|LJGI|TC70387 similar to UniRef100_A7NU91 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1358
Score = 1746 bits (881), Expect = 0.0
Identities = 881/881 (100%)
Strand = Plus / Plus
Query: 255 actctcccaccctcaattccaccgccactaccctctctacgactgcaccctcggcacatg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actctcccaccctcaattccaccgccactaccctctctacgactgcaccctcggcacatg 403
Query: 315 gcgcaacatctccctctccctctccgactcttcaccttcctccttcaccaacgttgtctc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcgcaacatctccctctccctctccgactcttcaccttcctccttcaccaacgttgtctc 463
Query: 375 ctccggtggcctcttctgcttatccgattccatgtcctgttccttgctcatcttcaacct 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ctccggtggcctcttctgcttatccgattccatgtcctgttccttgctcatcttcaacct 523
Query: 435 tctcgccaaaacctctaggaagattcagtaccccagttactctcttcacctcgagcatct 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tctcgccaaaacctctaggaagattcagtaccccagttactctcttcacctcgagcatct 583
Query: 495 cacgtttgtcacaaccccatctgggtacatcatattttctctgttctctgcatctgcaac 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cacgtttgtcacaaccccatctgggtacatcatattttctctgttctctgcatctgcaac 643
Query: 555 aaaccgggcattcgtttacgactcagaggtgcgatcatggcgacggttcaatggtttcgg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaaccgggcattcgtttacgactcagaggtgcgatcatggcgacggttcaatggtttcgg 703
Query: 615 accgattctcggcgataaactgcatcaacaaggcgttttcttcaaccggggtttgtattt 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 accgattctcggcgataaactgcatcaacaaggcgttttcttcaaccggggtttgtattt 763
Query: 675 tgcaaccccagaaccgttttcgattgtgagattcgatttggagagtggggtttgggagag 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgcaaccccagaaccgttttcgattgtgagattcgatttggagagtggggtttgggagag 823
Query: 735 acccgttggcgagttaccgggtcaactcacttttgctcggctggtgagtgatggagaagg 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 acccgttggcgagttaccgggtcaactcacttttgctcggctggtgagtgatggagaagg 883
Query: 795 gaaattgtatctgattggtggggttgggaacaatgggatttcaaggagtatgaagttgtg 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaaattgtatctgattggtggggttgggaacaatgggatttcaaggagtatgaagttgtg 943
Query: 855 ggaattgggtgaagcaggggattgggttgaagtgcagagtttgcctgagttaatgtgtag 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ggaattgggtgaagcaggggattgggttgaagtgcagagtttgcctgagttaatgtgtag 1003
Query: 915 gaaatttgtgtctgtgtgttatcataagtatgagcatgtttattgcttctggcatgaagg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gaaatttgtgtctgtgtgttatcataagtatgagcatgtttattgcttctggcatgaagg 1063
Query: 975 gatgatctgcatttgctgctatacatggcctgagatattgtattatttggtttctaggag 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 gatgatctgcatttgctgctatacatggcctgagatattgtattatttggtttctaggag 1123
Query: 1035 gacttggcattggcttcctaggtgcccttctttgcctttgaaatgtagctgtggtttcaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 gacttggcattggcttcctaggtgcccttctttgcctttgaaatgtagctgtggtttcaa 1183
Query: 1095 gtggttctcttttgttccaaagctctatgcttcagtttgaa 1135
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 gtggttctcttttgttccaaagctctatgcttcagtttgaa 1224
Score = 248 bits (125), Expect = 6e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 59 tgatgatgatgaaaatggatcccaaaatttggagcaaattgccacctgaaatcttggaat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgatgatgatgaaaatggatcccaaaatttggagcaaattgccacctgaaatcttggaat 207
Query: 119 acatcctctcatttcttcccctcaaaaccttgttgaatctcagatcaacctgcaaaggtt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 acatcctctcatttcttcccctcaaaaccttgttgaatctcagatcaacctgcaaaggtt 267
Query: 179 tctgg 183
|||||
Sbjct: 268 tctgg 272
>gnl|LJGI|BW629212 weakly similar to UniRef100_A9SVS4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(5%)
Length = 479
Score = 248 bits (125), Expect = 6e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 59 tgatgatgatgaaaatggatcccaaaatttggagcaaattgccacctgaaatcttggaat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tgatgatgatgaaaatggatcccaaaatttggagcaaattgccacctgaaatcttggaat 296
Query: 119 acatcctctcatttcttcccctcaaaaccttgttgaatctcagatcaacctgcaaaggtt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acatcctctcatttcttcccctcaaaaccttgttgaatctcagatcaacctgcaaaggtt 356
Query: 179 tctgg 183
|||||
Sbjct: 357 tctgg 361
Score = 93.7 bits (47), Expect = 2e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 255 actctcccaccctcaattccaccgccactaccctctctacgactgca 301
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 actctcccaccctcaattccaccgccactaccctctctacgactgca 479
>gnl|LJGI|GO023636 similar to UniRef100_Q9HFU1 Cluster: Ras2; n=1; Filobasidiella
neoformans|Rep: Ras2 - Cryptococcus neoformans
(Filobasidiella neoformans), partial (6%)
Length = 374
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 685 gaaccgttttcgattgtgagattcgatttggagagtggggtttgggagagacccgttggc 744
||||||||||| | ||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 264 gaaccgttttcattggtgagattcgatttggatagtggaaggtgggagagaccccttggt 323
Query: 745 gagttac 751
|||||||
Sbjct: 324 gagttac 330