Miyakogusa Predicted Gene
- Lj5g3v0308800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308800.1 CUFF.52824.1
(2847 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS357196 1170 0.0
gnl|LJGI|AV408571 755 0.0
gnl|LJGI|TC74801 similar to UniRef100_A7NU83 Cluster: Chromosome... 658 0.0
gnl|LJGI|BP075630 similar to UniRef100_A7NU83 Cluster: Chromosom... 325 9e-88
gnl|LJGI|TC81505 similar to UniRef100_A7PD03 Cluster: Chromosome... 214 2e-54
>gnl|LJGI|FS357196
Length = 594
Score = 1170 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Minus
Query: 1428 tgcttcttccatgcgtgaggaagatacagtgccatccagcactctgtggataactatttc 1487
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 594 tgcttcttccatgcgtgaggaagatacagtgccatgcagcactctgtggataactatttc 535
Query: 1488 tcgtagcagcttaccgttcctcacagacgaggagctaatgggcatttgcaacctggccat 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tcgtagcagcttaccgttcctcacagacgaggagctaatgggcatttgcaacctggccat 475
Query: 1548 tgggaacactggctccattgtgaggctgacacaagcaaacatgcagatgggatgtggttg 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgggaacactggctccattgtgaggctgacacaagcaaacatgcagatgggatgtggttg 415
Query: 1608 gttggttgagtgcagtaatgttgatggtgcagtttctgttctaaggaatcttcgtggttg 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gttggttgagtgcagtaatgttgatggtgcagtttctgttctaaggaatcttcgtggttg 355
Query: 1668 tccaggattgttcttccagatagaattcagcaaaccaggaaatcaaaatgctgtaccatt 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tccaggattgttcttccagatagaattcagcaaaccaggaaatcaaaatgctgtaccatt 295
Query: 1728 ttcaattaaaccagaaaacaacggcatggagcttgtatcccccagaataaatactgagaa 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttcaattaaaccagaaaacaacggcatggagcttgtatcccccagaataaatactgagaa 235
Query: 1788 tcataatagtggagtacatggtgcacctctgtctcagtcaaactggcactttcctgattc 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcataatagtggagtacatggtgcacctctgtctcagtcaaactggcactttcctgattc 175
Query: 1848 cagggagatgtcagaagttggagcaaggaatgataatgtatcactggatccacatcgagg 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cagggagatgtcagaagttggagcaaggaatgataatgtatcactggatccacatcgagg 115
Query: 1908 aggtaatgctccacatttattccctggaacacaaggaccttccattctgccacctcagca 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aggtaatgctccacatttattccctggaacacaaggaccttccattctgccacctcagca 55
Query: 1968 aattcagtcatctcctttcattcgccctgtttatgttcctccaaatggtccgtg 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aattcagtcatctcctttcattcgccctgtttatgttcctccaaatggtccgtg 1
>gnl|LJGI|AV408571
Length = 433
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 267 gaattatacggttactaggatatctaaggaacatgaaagcattggtgaagcatcaggaaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 gaattatacggttactaggatatctaaggaacatgaaagcattggtgaagcatcaggaaa 112
Query: 327 aggttcacattttgataatggagtctcaaggtccatgggcgttgagatgggtgaggaagg 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aggttcacattttgataatggagtctcaaggtccatgggcgttgagatgggtgaggaagg 172
Query: 387 caatatgctccatgttaggtgctccacacctagggactcagtaacccatcagatattctc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 caatatgctccatgttaggtgctccacacctagggactcagtaacccatcagatattctc 232
Query: 447 tcctgcagttaaaacccaagtagactataggtttaatttatttgatggtagaaatgattc 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcctgcagttaaaacccaagtagactataggtttaatttatttgatggtagaaatgattc 292
Query: 507 cccgaatgttgagaaaacgcaaggtttaaatatgagtttgaattcacctctgttgaggtc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cccgaatgttgagaaaacgcaaggtttaaatatgagtttgaattcacctctgttgaggtc 352
Query: 567 ctctagcggagcttttagaaatgttcatgcttctcctagtcatcattttatgtcgccaac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctctagcggagcttttagaaatgttcatgcttctcctagtcatcattttatgtcgccaac 412
Query: 627 tgcttcaacaagaagtcaaat 647
|||||||||||||||||||||
Sbjct: 413 tgcttcaacaagaagtcaaat 433
Score = 95.6 bits (48), Expect = 1e-18
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 66 ggctcttaacaaggacccgtcactgcggaaatggatgttgcgcagatg 113
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggctcttaacaaggacccgtcactgcggaaatggatgttgcgcagatg 53
>gnl|LJGI|TC74801 similar to UniRef100_A7NU83 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 627
Score = 658 bits (332), Expect = 0.0
Identities = 361/371 (97%)
Strand = Plus / Plus
Query: 2477 gcagatattcaaataccatacctgagcctgctgaatggcctacaaaattagacatgacta 2536
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gcagatattcaaataccatacctgagcctgctgaatggcctacncaattagacatgacta 60
Query: 2537 aacgcaccgattttcgacatgtgaaatcaacattagctgctacaccatctcatagaaggg 2596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacgcaccgattttcgacatgtgaaatcaacattagctgctacaccatctcatagaaggg 120
Query: 2597 aagtgtgccatttgatcccatcttccactagtgaccacaaaaggtttcaggatttcgtat 2656
||||||||| |||||||||||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 121 aagtgtgccctttgatcccatcttcccctagtgaccccgaaaggtttcaggatttcgtat 180
Query: 2657 catacttaaagcagaaggattgtgctggagttatcaaaatcccagcttcaaaatccatat 2716
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 catacttaaagccgaaggattgtgctggagttatccaaatcccagcttcaaaatccatat 240
Query: 2717 gggcaaggctgctattcatactcccccactcacttgaaacatgctctttgctttctattg 2776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggcaaggctgctattcatactcccccactcacttgaaacatgctctttgctttctattg 300
Query: 2777 ctcctgatccatctgattgcctcattgctttggttcttcccaaggaaacaaactttgatt 2836
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 ctcctgatccatctgattgcctcattgctttggttcttcccaaggaaaccaactttgatt 360
Query: 2837 ggatatgacta 2847
|||||||||||
Sbjct: 361 ggatatgacta 371
>gnl|LJGI|BP075630 similar to UniRef100_A7NU83 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 471
Score = 325 bits (164), Expect = 9e-88
Identities = 193/200 (96%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 2647 gatttcgtatcatacttaaagcagaaggattgtgctggagttatcaaaatcccagcttca 2706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatttcgtatcatacttaaagcagaaggattgtgctggagttatcaaaatcccagcttcc 412
Query: 2707 aaatccatatgggcaaggctgctattcatactcccccactcacttgaaacatgctctttg 2766
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 411 aaatccatatggacaaggctgctattcatacttccccactcacttgaaacatgctctttg 352
Query: 2767 ctttctattgctcctgatccatctgattgcctcattg-ctttggttctt-cccaaggaaa 2824
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 351 ctttctattgctcctgatccatctgattgcctcattgcctttggttcttgcccaaggaaa 292
Query: 2825 caaactttgattggatatga 2844
| |||| |||||||||||||
Sbjct: 291 cgaactctgattggatatga 272
>gnl|LJGI|TC81505 similar to UniRef100_A7PD03 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 1066
Score = 214 bits (108), Expect = 2e-54
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 2348 tgcctgtccaagaagtagtcagtatggaatgttcagggcagtctctgcagtatcagtggc 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 tgcctgtccaagaagtagtcagtatggaatgttcagggcagtctctgcagtatcagtggc 1018
Query: 2408 agggcaatctctgtaaaagtggggttaactactgcacaatttatgcat 2455
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 agggcaatctctgtaaaagtggggttaactactgcacaatttatgcat 1066
Score = 60.0 bits (30), Expect = 8e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2260 ccttctccaccacctctacccctgacacag 2289
||||||||||||||||||||||||||||||
Sbjct: 871 ccttctccaccacctctacccctgacacag 900