Miyakogusa Predicted Gene
- Lj5g3v0308440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308440.1 Non Chatacterized Hit- tr|C0P9J5|C0P9J5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,46.83,1e-18,Acyl-CoA
binding protein,Acyl-CoA-binding protein, ACBP; ACBP,Acyl-CoA-binding
protein, ACBP; seg,NU,CUFF.52795.1
(927 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74257 similar to UniRef100_A7NU70 Cluster: Chromosome... 793 0.0
gnl|LJGI|TC72717 weakly similar to UniRef100_A3DHP9 Cluster: AAA... 398 e-110
gnl|LJGI|BP077531 161 1e-38
gnl|LJGI|TC80795 145 6e-34
>gnl|LJGI|TC74257 similar to UniRef100_A7NU70 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 751
Score = 793 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Plus
Query: 1 atggaactcgtgagcgcgagtgatcttttcgtcactgcgtccatcgcaatccttctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggaactcgtgagcgcgagtgatcttttcgtcactgcgtccatcgcaatccttctctca 283
Query: 61 ctcctcgtcgcgaaacttgtctcgttagccaccaccaccgacactcaaaccgccacgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctcctcgtcgcgaaacttgtctcgttagccaccaccaccgacactcaaaccgccacgatc 343
Query: 121 catcattatcatgaagaagaaccggccggtccggttcttcaggaggatcggcttacggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 catcattatcatgaagaagaaccggccggtccggttcttcaggaggatcggcttacggtt 403
Query: 181 cagaccgagagcaaggttggttttattaatccggttcaagttgcaaccaatgtggaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cagaccgagagcaaggttggttttattaatccggttcaagttgcaaccaatgtggaaaaa 463
Query: 241 accggacacgaattggtcgaagaggacacggacctcacggtcgagtccggttcggattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 accggacacgaattggtcgaagaggacacggacctcacggtcgagtccggttcggattct 523
Query: 301 gccgtcgggttaacggcggaggtggtggaagaggaagctgcggagcgcgtgggggagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gccgtcgggttaacggcggaggtggtggaagaggaagctgcggagcgcgtgggggagatt 583
Query: 361 gttgaagaggaagcttcggcggagacggcggttccggttg 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gttgaagaggaagcttcggcggagacggcggttccggttg 623
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 465 agagttgtttatggcggctactggatttgttgctaggaatggat 508
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agagttgtttatggcggctactggatttgttgctaggaatggat 731
>gnl|LJGI|TC72717 weakly similar to UniRef100_A3DHP9 Cluster: AAA ATPase, central
region; n=1; Clostridium thermocellum ATCC 27405|Rep:
AAA ATPase, central region - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237), partial (5%)
Length = 521
Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 727 cctggatggatgaaagatagttctgctggaacaggtgaacatgaaccgatggagtcagaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggatggatgaaagatagttctgctggaacaggtgaacatgaaccgatggagtcagaa 60
Query: 787 agttctgagtcggctgctccaagcacatctttgcctcatcagcaaatgatggtaactgat 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttctgagtcggctgctccaagcacatctttgcctcatcagcaaatgatggtaactgat 120
Query: 847 agagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcagatttg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcagatttg 180
Query: 907 gagaacaaggttaagaaatga 927
|||||||||||||||||||||
Sbjct: 181 gagaacaaggttaagaaatga 201
>gnl|LJGI|BP077531
Length = 387
Score = 161 bits (81), Expect = 1e-38
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 847 agagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcagatttg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcagatttg 269
Query: 907 gagaacaaggttaagaaatga 927
|||||||||||||||||||||
Sbjct: 268 gagaacaaggttaagaaatga 248
>gnl|LJGI|TC80795
Length = 557
Score = 145 bits (73), Expect = 6e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 843 tgatagagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcaga 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatagagaactcgaactagagtctggtgctcaggaccatagccctcttaccgagtcaga 60
Query: 903 tttggagaacaag 915
|||||||||||||
Sbjct: 61 tttggagaacaag 73