Miyakogusa Predicted Gene

Lj5g3v0308360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0308360.1 tr|D7MA34|D7MA34_ARALL Predicted protein
(Fragment) OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,56.14,0.00000000000007,DUF616,Protein of unknown function
DUF616; SUBFAMILY NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NUL,CUFF.52788.1
         (780 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78758 weakly similar to UniRef100_A7NTK4 Cluster: Chr...   942   0.0  

>gnl|LJGI|TC78758 weakly similar to UniRef100_A7NTK4 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 594

 Score =  942 bits (475), Expect = 0.0
 Identities = 475/475 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttccacaacaacaatagcctcagcgtctcgatccccgtctccgacgacgaacccgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgttccacaacaacaatagcctcagcgtctcgatccccgtctccgacgacgaacccgat 179

                                                                       
Query: 61  gaactgggtcggatgcgtgtgcgcgcgcggcggaaacggaagaaactcacccaccgtcgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaactgggtcggatgcgtgtgcgcgcgcggcggaaacggaagaaactcacccaccgtcgg 239

                                                                       
Query: 121 ttcctccggaagcttcttgtcagatactggatgctactcatcatcatccccaccgcgtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttcctccggaagcttcttgtcagatactggatgctactcatcatcatccccaccgcgtgt 299

                                                                       
Query: 181 ttgctcttcttcgaggcctccagaatcgctcggaagcctagtttcaatgtcaactccgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttgctcttcttcgaggcctccagaatcgctcggaagcctagtttcaatgtcaactccgat 359

                                                                       
Query: 241 atacaaacacgcacgccagttgatcgatctagtcccccattgaggaaggagacacacagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atacaaacacgcacgccagttgatcgatctagtcccccattgaggaaggagacacacagc 419

                                                                       
Query: 301 aacctcaatcgccttgatcctactacccatgttgttgctggtgtcagagaacgttgtttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aacctcaatcgccttgatcctactacccatgttgttgctggtgtcagagaacgttgtttg 479

                                                                       
Query: 361 aagctcctgccacctgaaaaacttgatcaactggatattccggtggaagaagaatctaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aagctcctgccacctgaaaaacttgatcaactggatattccggtggaagaagaatctaga 539

                                                                  
Query: 421 ttgcctgttggtaaagttctatacatgtcagagagtgatctgtctattccgggag 475
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttgcctgttggtaaagttctatacatgtcagagagtgatctgtctattccgggag 594