Miyakogusa Predicted Gene

Lj5g3v0294890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0294890.1 Non Chatacterized Hit- tr|E0VVF7|E0VVF7_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,46.49,6e-18,seg,NULL; Repeated motif present between
transmembrane,Cystinosin/ERS1p repeat; PQ-loop,NULL;
SUBFAM,CUFF.52755.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76281 similar to UniRef100_A7NU14 Cluster: Chromosome...   876   0.0  

>gnl|LJGI|TC76281 similar to UniRef100_A7NU14 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 1173

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtatctagggattgatgtcacttgcgccgtgaattctctccgccatggaaacttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggagtatctagggattgatgtcacttgcgccgtgaattctctccgccatggaaacttc 172

                                                                       
Query: 61  cctgacaaggattgcttgctccctctcatttccaaactcctcggttacgccatcgtcgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cctgacaaggattgcttgctccctctcatttccaaactcctcggttacgccatcgtcgcc 232

                                                                       
Query: 121 gcttccaccaccgtcaaactccctcagattttgaagattctgaagcatcagagcgtgaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gcttccaccaccgtcaaactccctcagattttgaagattctgaagcatcagagcgtgaga 292

                                                                       
Query: 181 ggtctcagcatgctgtcttttgagcttgaagttgttggatataccattgctctggcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggtctcagcatgctgtcttttgagcttgaagttgttggatataccattgctctggcttat 352

                                                                       
Query: 241 tgtcttcacaaaggccttccgttttctgcttatggagaattgttgttcctcttgattcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgtcttcacaaaggccttccgttttctgcttatggagaattgttgttcctcttgattcaa 412

                                                                       
Query: 301 gctttaatattggttgccataatctactactattctcgacctgtgcgtacagcaacatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gctttaatattggttgccataatctactactattctcgacctgtgcgtacagcaacatgg 472

                                                                       
Query: 361 atccgggcattactatattctgctgcagcacccactatcttagccggtcaaattgatcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atccgggcattactatattctgctgcagcacccactatcttagccggtcaaattgatcct 532

                                 
Query: 421 ttcctctttgaggctttgtatg 442
           ||||||||||||||||||||||
Sbjct: 533 ttcctctttgaggctttgtatg 554