Miyakogusa Predicted Gene
- Lj5g3v0292810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0292810.1 Non Chatacterized Hit- tr|I3SY08|I3SY08_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,9.94922e-44,LSM,Ribonucleoprotein LSM domain; no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; SMALL
NUC,CUFF.52751.1
(270 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69363 527 e-149
gnl|LJGI|TC76058 416 e-116
gnl|LJGI|TC78822 402 e-112
gnl|LJGI|BW600304 337 2e-92
>gnl|LJGI|TC69363
Length = 567
Score = 527 bits (266), Expect = e-149
Identities = 269/270 (99%)
Strand = Plus / Plus
Query: 1 atggcgactatacctgttaatccaaagccattcttgaacaatttgactgggaagccagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcgactatacctgttaatccaaagccattcttgaacaatttgactgggaagccagtt 155
Query: 61 attgtcaaactcaagtggggaatggagtacaagggatatcttgtttcagttgactcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 attgtcaaactcaagtggggaatggagtacaagggatatcttgtttcagttgactcctac 215
Query: 121 atgaacttgcagctggccaacactgaagagtacattgagggtcagtttactggaaattta 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgaacttgcggctggccaacactgaagagtacattgagggtcagtttactggaaattta 275
Query: 181 ggagagattttaatcagatgcaacaacgtcctctaccttcgtggagtaccagaggatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggagagattttaatcagatgcaacaacgtcctctaccttcgtggagtaccagaggatgaa 335
Query: 241 gaaattgaagatgctccagaagactagaat 270
||||||||||||||||||||||||||||||
Sbjct: 336 gaaattgaagatgctccagaagactagaat 365
>gnl|LJGI|TC76058
Length = 793
Score = 416 bits (210), Expect = e-116
Identities = 255/270 (94%)
Strand = Plus / Plus
Query: 1 atggcgactatacctgttaatccaaagccattcttgaacaatttgactgggaagccagtt 60
|||||||||||||| || ||||| ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 57 atggcgactataccagtcaatcccaagcctttcctgaacaatttgactgggaaaccagtt 116
Query: 61 attgtcaaactcaagtggggaatggagtacaagggatatcttgtttcagttgactcctac 120
||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 117 attgtgaaacttaagtggggaatggagtacaagggatatcttgtttcagttgattcctat 176
Query: 121 atgaacttgcagctggccaacactgaagagtacattgagggtcagtttactggaaattta 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 177 atgaacttgcagctggccaacactgaagagtacattgagggacagtttactggaaattta 236
Query: 181 ggagagattttaatcagatgcaacaacgtcctctaccttcgtggagtaccagaggatgaa 240
||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 237 ggagaaatattaatcagatgcaacaatgtcctctaccttcgtggagtaccagaagatgaa 296
Query: 241 gaaattgaagatgctccagaagactagaat 270
||||||||||||||||||||||||||||||
Sbjct: 297 gaaattgaagatgctccagaagactagaat 326
>gnl|LJGI|TC78822
Length = 559
Score = 402 bits (203), Expect = e-112
Identities = 255/271 (94%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 1 atggcgactatacctgttaatccaaagccattcttgaacaatttgactgggaagccagtt 60
|||||||||||||| || ||||| ||||| ||| ||||||||||||||||||| ||||||
Sbjct: 141 atggcgactataccagtcaatcccaagcctttcctgaacaatttgactgggaaaccagtt 200
Query: 61 attgtcaaactcaagtggggaatggagtacaagggatatcttgtttcagttgactcctac 120
||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 attgtgaaacttaagtggggaatggagtacaagggatatcttgtttcagttgattcctat 260
Query: 121 atgaacttgcagctggccaacactgaagagtacattgagggtcagtttactggaaattta 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 atgaacttgcagctggccaacactgaagagtacattgagggacagtttactggaaattta 320
Query: 181 ggagagattttaatc-agatgcaacaacgtcctctaccttcgtggagtaccagaggatga 239
||||| || |||||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 321 ggagaaatattaatcaagatgcaacaatgtcctctaccttcgtggagtaccagaagatga 380
Query: 240 agaaattgaagatgctccagaagactagaat 270
|||||||||||||||||||||||||||||||
Sbjct: 381 agaaattgaagatgctccagaagactagaat 411
>gnl|LJGI|BW600304
Length = 411
Score = 337 bits (170), Expect = 2e-92
Identities = 191/198 (96%)
Strand = Plus / Plus
Query: 73 aagtggggaatggagtacaagggatatcttgtttcagttgactcctacatgaacttgcag 132
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 36 aagtggggaatggagtacaagggatatcttgtttcagttgattcctatatgaacttgcag 95
Query: 133 ctggccaacactgaagagtacattgagggtcagtttactggaaatttaggagagatttta 192
||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 96 ctggccaacactgaagagtacattgagggacagtttactggaaatttaggagaaatatta 155
Query: 193 atcagatgcaacaacgtcctctaccttcgtggagtaccagaggatgaagaaattgaagat 252
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 156 atcagatgcaacaatgtcctctaccttcgtggagtaccagaagatgaagaaattgaagat 215
Query: 253 gctccagaagactagaat 270
||||||||||||||||||
Sbjct: 216 gctccagaagactagaat 233