Miyakogusa Predicted Gene
- Lj5g3v0290690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0290690.1 Non Chatacterized Hit- tr|D8RX66|D8RX66_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.05,1e-16,seg,NULL; Domain in SPla and the RYanodine
Receptor.,SPla/RYanodine receptor subgroup; SPRY,SPla/RYa,CUFF.52735.1
(1296 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60844 similar to UniRef100_A7NU02 Cluster: Chromosome... 258 8e-68
>gnl|LJGI|TC60844 similar to UniRef100_A7NU02 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 2072
Score = 258 bits (130), Expect = 8e-68
Identities = 345/417 (82%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 752 cctaccctaggagcattggattcaactcaaatggttctgtcttttttgatggaatgaaac 811
|||||||| |||| ||||| |||||||| ||||||||||||| | |||||||||||||||
Sbjct: 1118 cctaccctgggagtattgggttcaactccaatggttctgtctatcttgatggaatgaaac 1177
Query: 812 ttatattggaatctgagaaggctcaatgggcaggaaccaatacaatagctggctgtggat 871
|| |||| || ||||||||||| ||||| |||| | ||| | ||||||||| |
Sbjct: 1178 ttgtattcgagtctgagaaggcagaatggataggagctgataaggttattggctgtgggt 1237
Query: 872 ttgatccaagaatgaagaaggttttcttcacattaggctcagagttagtgcatgtgattc 931
|||||||||| |||||| |||||||||||||||| ||||||||| ||||||| || |
Sbjct: 1238 ttgatccaaggcagaagaaagttttcttcacattagactcagagttgatgcatgtaatcc 1297
Query: 932 actgtcaattagtggaatttggcactccacttttcccaactttggctgcaaacacagaca 991
| || || | || | ||||||||||||||| | ||||| ||||||||||| | |||||
Sbjct: 1298 attgccagtcagaaggatttggcactccactctatccaacattggctgcaaatatagaca 1357
Query: 992 ttgaggttttagttaattttggacaaagtgcattcaaatatgcacctgcaaatgcaaaca 1051
|| |||| ||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 1358 ttcaggtactagttaattttggacaaagtgcatttaaatatgcacctgcaaatgcgcaga 1417
Query: 1052 gaacaccaaatccatgcttcatagccccacttgtgtattcttctggtgctaccctgggct 1111
|||||||||| ||||| || ||||| ||||||||| |||| | |||||| |||
Sbjct: 1418 gaacaccaaacccatgttttatagcaccacttgtgaattc------gccaaccctgagct 1471
Query: 1112 atgatgacagcaaggagctattctccatgggaaggattgattctcagtggcttaatc 1168
| || ||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 1472 acgacgacagcaaggaactattctctatgggaaggattgattctcaatggcttaatc 1528
Score = 97.6 bits (49), Expect = 2e-19
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 478 cctggccctccattgggaaactatgcattcccacaagaagcctattttgaaatcaccatc 537
||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 798 cctggtcctcctttgggaaactatgctttcccacaagaagcctattttgaaatcatcatc 857
Query: 538 ttgaattct 546
||| |||||
Sbjct: 858 ttgtattct 866
Score = 61.9 bits (31), Expect = 9e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 169 ttcagctgggctgatcatccctaccttgctgctgatgctgttgaaaatggatggtctaga 228
|||||||||||||| |||| | | | |||| |||||||| |||||||||||||||| ||
Sbjct: 459 ttcagctgggctgagaatccttccatggctgttgatgctggtgaaaatggatggtctcga 518
Query: 229 tttgcattcac 239
||||| |||||
Sbjct: 519 tttgctttcac 529