Miyakogusa Predicted Gene
- Lj5g3v0290680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0290680.1 Non Chatacterized Hit- tr|D8S0G6|D8S0G6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.32,2e-18,zinc finger,Zinc finger, C2H2-like;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; ZINC_FINGER_C2H2_2,Zinc
fi,CUFF.52831.1
(1143 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59927 similar to UniRef100_A7NU01 Cluster: Chromosome... 1156 0.0
gnl|LJGI|FS356142 similar to UniRef100_A7NU01 Cluster: Chromosom... 662 0.0
gnl|LJGI|AV773558 similar to UniRef100_Q8MP30 Cluster: Uncharact... 56 5e-07
>gnl|LJGI|TC59927 similar to UniRef100_A7NU01 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 746
Score = 1156 bits (583), Expect = 0.0
Identities = 600/608 (98%)
Strand = Plus / Plus
Query: 87 agtctcagtctcagtcttattcccgcacagacacaacagattccgatgctgctcctccat 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agtctcagtctcagtcttattcccgcacagacacaacagattccgatgctgctcctccat 198
Query: 147 cgagatcgacatggtgagagacaacaagacaggctcctacgccgctaaacagaacaaggt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cgagatcgacatggtgagagacaacaagacaggctcctacgccgctaaacagaacaaggt 258
Query: 207 cgtcgtcctctgggacctcgacaacaaannnnnnngcggcccaccgtaccacgccgccgt 266
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 259 cgtcgtcctctgggacctcgacaacaaacccccccgcggcccaccgtaccacgccgccgt 318
Query: 267 ctccctcaaaaccctagccgaatccttcggcgacgtcgtcgacatctccgcctacgccaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctccctcaaaaccctagccgaatccttcggcgacgtcgtcgacatctccgcctacgccaa 378
Query: 327 ccgccacgccttcatccacctccctcagtgggtcctccacgagcgccgccaacgcaaaac 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccgccacgccttcatccacctccctcagtgggtcctccacgagcgccgccaacgcaaaac 438
Query: 387 caccgacatcctcgagaaaaagggcatcgtcacgccctctgatccctacgtctgcaccgt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caccgacatcctcgagaaaaagggcatcgtcacgccctctgatccctacgtctgcaccgt 498
Query: 447 ctgcggccgcaagtgcaagaccaatctcgatctgaagaagcacttcaagcagttacatca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgcggccgcaagtgcaagaccaatctcgatctgaagaagcacttcaagcagttacatca 558
Query: 507 gcgcgagcggcagaagaagctgaatcgcatgaactcgctcaaggggaagaagcgacagcg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcgcgagcggcagaagaagctgaatcgcatgaactcgctcaaggggaagaagcgacagcg 618
Query: 567 gtttaaggagaggtttattcgtgggaaccataagtataacgaggcggccaggacgcttgt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtttaaggagaggtttattcgtgggaaccataagtataacgaggcggccaggacgcttgt 678
Query: 627 gacgcccaaggttgggtatggtttagcgtcggagctgcggcgtgctggggtttttgtcaa 686
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 679 gacgcccaaggttgggtatggtttagcctcggagctgcggcgtgctggggtttttgtcaa 738
Query: 687 gacggtgg 694
||||||||
Sbjct: 739 gacggtgg 746
>gnl|LJGI|FS356142 similar to UniRef100_A7NU01 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 713
Score = 662 bits (334), Expect = 0.0
Identities = 337/338 (99%)
Strand = Plus / Minus
Query: 666 gcgtgctggggtttttgtcaagacggtggaggataagcctcaggcggcggattgggcgtt 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gcgtgctggggtttttgtcaagacggtggaggataagcctcaggcggcggattgggcgtt 654
Query: 726 gaagaggcagatgcagcattccatgagtagagggattgattggttgtttttggtttcaga 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaagaggcagatgcagcattccatgagtagagggattgattggttgtttttggtttcaga 594
Query: 786 tgattcggatttctccgagatgttgaagcgggccagggaggccaatttggggaccgtggt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgattcggatttctccgagatgttgaagcgggccagggaggccaatttggggaccgtggt 534
Query: 846 ggtcggggatgccgatagggcattggggcagcatgctgatttttgggttccctggattgc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggtcggggatgccgatagggcattggggcagcatgctgatttttgggttccctggattgc 474
Query: 906 ggtcgagaagggcgaggtttcggagatggatttgaagaacagggagaggaggaggagaag 965
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ggtcgagaagggcgaggttttggagatggatttgaagaacagggagaggaggaggagaag 414
Query: 966 aacaacaacagaggattcgccggatggcttgtttttca 1003
||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aacaacaacagaggattcgccggatggcttgtttttca 376
Score = 56.0 bits (28), Expect = 5e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1116 agaagaaggagggttttattctttataa 1143
||||||||||||||||||||||||||||
Sbjct: 281 agaagaaggagggttttattctttataa 254
>gnl|LJGI|AV773558 similar to UniRef100_Q8MP30 Cluster: Uncharacterized histidine-rich
protein JC2V2_0_01666 precursor; n=1; Dictyostelium
discoideum|Rep: Uncharacterized histidine-rich protein
JC2V2_0_01666 precursor - Dictyostelium discoideum (Slime
mold), partial (9%)
Length = 451
Score = 56.0 bits (28), Expect = 5e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1116 agaagaaggagggttttattctttataa 1143
||||||||||||||||||||||||||||
Sbjct: 301 agaagaaggagggttttattctttataa 274
Score = 56.0 bits (28), Expect = 5e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 976 gaggattcgccggatggcttgtttttca 1003
||||||||||||||||||||||||||||
Sbjct: 441 gaggattcgccggatggcttgtttttca 414