Miyakogusa Predicted Gene

Lj5g3v0290490.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0290490.1 tr|Q2R178|Q2R178_ORYSJ Lipin, N-terminal
conserved region family protein, expressed OS=Oryza sativa
,37.33,6e-17,LNS2,LNS2, Lipin/Ned1/Smp2; Lipin_N,Lipin, N-terminal; no
description,HAD-like domain; LIPIN 3-RELAT,CUFF.52724.1
         (1647 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594983 homologue to UniRef100_A7PSV9 Cluster: Chromos...    62   1e-08

>gnl|LJGI|BW594983 homologue to UniRef100_A7PSV9 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 498

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1362 tttacaggacatcagagcactttttcctcctgattgcaatccgttctatgctggttttgg 1421
            ||||||||| ||||||  |||||| ||| |||||| |||||| ||||||||||| |||||
Sbjct: 379  tttacaggatatcagaagacttttcccttctgattacaatccattctatgctgggtttgg 438

                               
Query: 1422 aaatagggtaactgatgaa 1440
             ||||| |  |||||||||
Sbjct: 439  caatagagacactgatgaa 457