Miyakogusa Predicted Gene
- Lj5g3v0290460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0290460.1 Non Chatacterized Hit- tr|K4AJX8|K4AJX8_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,40.74,2e-18,DUF827,Protein of unknown function DUF827, plant;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY,CUFF.52734.1
(1179 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67688 similar to UniRef100_A7EMZ7 Cluster: TATA-box-b... 1263 0.0
gnl|LJGI|DC593657 749 0.0
gnl|LJGI|FS359232 similar to UniRef100_A7NTV4 Cluster: Chromosom... 60 3e-08
>gnl|LJGI|TC67688 similar to UniRef100_A7EMZ7 Cluster: TATA-box-binding protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: TATA-box-binding
protein - Sclerotinia sclerotiorum (strain ATCC 18683 /
1980 / Ss-1) (Whitemold) (Whetzelinia sclerotiorum),
partial (11%)
Length = 774
Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Plus
Query: 1 atggaggatattgaaaacaagccacactcagaatcctccacaagaaatgctgaactgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atggaggatattgaaaacaagccacactcagaatcctccacaagaaatgctgaactgaag 197
Query: 61 ccaccagcagaaacccctcaagaaaattttgtagcaataaatccacccaataatctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ccaccagcagaaacccctcaagaaaattttgtagcaataaatccacccaataatctttct 257
Query: 121 tccaatgaagcttccatcaacccacttggtaataacagtgaagtagagcctggcattcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tccaatgaagcttccatcaacccacttggtaataacagtgaagtagagcctggcattcgt 317
Query: 181 ttgccggtgacagagttttcgacaaatgcttctgatgttgaaactgtaggacaggatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttgccggtgacagagttttcgacaaatgcttctgatgttgaaactgtaggacaggatgaa 377
Query: 241 catcctcccatagataattcaacttcaaccccaaaagttcatggaacagaagaaagtaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 catcctcccatagataattcaacttcaaccccaaaagttcatggaacagaagaaagtaac 437
Query: 301 cagggaaccatagccgcagattcttcaccaggagctttagaagatatctttaacaggcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cagggaaccatagccgcagattcttcaccaggagctttagaagatatctttaacaggcag 497
Query: 361 caggatggtggttcaaccgcgaatgcggcgacaagtgatgttgataatctgatgaatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 caggatggtggttcaaccgcgaatgcggcgacaagtgatgttgataatctgatgaatctc 557
Query: 421 tccacttcctcttctgaaccaaaagagttgcaaattgacccacctcatagtgatgttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tccacttcctcttctgaaccaaaagagttgcaaattgacccacctcatagtgatgttccc 617
Query: 481 atagataattcaggttcaacaccaaatgctgcagttgatgtaacagaacaaagccacaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atagataattcaggttcaacaccaaatgctgcagttgatgtaacagaacaaagccacaag 677
Query: 541 gaagctgtggctgaagattctaaacttgcagttttagaagatgcatttaataggcagcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gaagctgtggctgaagattctaaacttgcagttttagaagatgcatttaataggcagcat 737
Query: 601 gatggtggttctacttctggtgatggcggcgatgttg 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 738 gatggtggttctacttctggtgatggcggcgatgttg 774
>gnl|LJGI|DC593657
Length = 446
Score = 749 bits (378), Expect = 0.0
Identities = 405/413 (98%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 atggaggatattgaaaacaagccacactcagaatcctccacaagaaatgctgaactgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggaggatattgaaaacaagccacactcagaatcctccacaagaaatgctgaactgaag 93
Query: 61 ccaccagcagaaacccctcaagaaaattttgtagcaataaatccacccaataatctttct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ccaccagcagaaacccctcaagaaaattttgtagcaataaatccacccaataatctttcg 153
Query: 121 tccaa-tgaagcttccatcaacccacttggtaataacagtgaagtagagcctggcattcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ggggggtgaagcttccatcaacccacttggtaataacagtgaagtagagcctggcattcg 213
Query: 180 tttgccggtgacagagttttcgacaaatgcttctgatgttgaaactgtaggacaggatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tttgccggtgacagagttttcgacaaatgcttctgatgttgaaactgtaggacaggatga 273
Query: 240 acatcctcccatagataattcaacttcaaccccaaaagttcatggaacagaagaaagtaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acatcctcccatagataattcaacttcaaccccaaaagttcatggaacagaagaaagtaa 333
Query: 300 ccagggaaccatagccgcagattcttcaccaggagctttagaagatatctttaacaggca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccagggaaccatagccgcagattcttcaccaggagctttagaagatatctttaacaggca 393
Query: 360 gcaggatggtggttcaaccgcgaatgcggcgacaagtgatgttgataatctga 412
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 394 gcaggatggtggttcaaccgcgaatgcggcgacnagtgatgttgataatctga 446
>gnl|LJGI|FS359232 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 510
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1081 gaactcgcaaagctcagagtggaagagatggagcaagg 1118
||||| ||| ||||||||||||||||||||||||||||
Sbjct: 275 gaacttgcacagctcagagtggaagagatggagcaagg 238