Miyakogusa Predicted Gene
- Lj5g3v0290450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0290450.1 Non Chatacterized Hit- tr|F6I569|F6I569_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.04,3e-18,seg,NULL; coiled-coil,NULL; DUF827,Protein of unknown
function DUF827, plant; SUBFAMILY NOT NAMED,NU,CUFF.52733.1
(1875 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423371 weakly similar to UniRef100_A7NTV4 Cluster: Ch... 866 0.0
gnl|LJGI|TC70399 similar to UniRef100_A7NTV4 Cluster: Chromosome... 759 0.0
gnl|LJGI|TC62021 similar to UniRef100_A7NTV4 Cluster: Chromosome... 214 1e-54
gnl|LJGI|FS359232 similar to UniRef100_A7NTV4 Cluster: Chromosom... 60 5e-08
>gnl|LJGI|AV423371 weakly similar to UniRef100_A7NTV4 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 437
Score = 866 bits (437), Expect = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 929 agaaatcatcgctcgcctccattaggcaaagagaaggaatggcctccattacagtttcat 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaatcatcgctcgcctccattaggcaaagagaaggaatggcctccattacagtttcat 60
Query: 989 ctcttgaagctgaactggacaaaactagatctgacatagttttggctcaggcgaaggaaa 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcttgaagctgaactggacaaaactagatctgacatagttttggctcaggcgaaggaaa 120
Query: 1049 atgatggaagagagatgatcatcgagctaccaaagaaactaaaagaagcggctgaagagg 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgatggaagagagatgatcatcgagctaccaaagaaactaaaagaagcggctgaagagg 180
Query: 1109 ctaatcaggcaaatttacatgccgaagcagctcgtgaagagctgcgaagggtgaaggagg 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctaatcaggcaaatttacatgccgaagcagctcgtgaagagctgcgaagggtgaaggagg 240
Query: 1169 aggcggagcaagccaaggccggtgcaagcacaatgcaaagtaaactacttgcagctcaga 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcggagcaagccaaggccggtgcaagcacaatgcaaagtaaactacttgcagctcaga 300
Query: 1229 aggagatagaagctgcaagggcttctgaaaggttggcattatcagcagttaaagcactgc 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggagatagaagctgcaagggcttctgaaaggttggcattatcagcagttaaagcactgc 360
Query: 1289 aagagagtgagtctgctcgaagcaacaatgaagtggattcgtcagctggggtgacacttt 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagagagtgagtctgctcgaagcaacaatgaagtggattcgtcagctggggtgacacttt 420
Query: 1349 ctttggaggagtactat 1365
|||||||||||||||||
Sbjct: 421 ctttggaggagtactat 437
>gnl|LJGI|TC70399 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 851
Score = 759 bits (383), Expect = 0.0
Identities = 397/404 (98%)
Strand = Plus / Plus
Query: 1472 agaagttgaatgaagtgactcaagaaatcgctgctagaagggagtctctgaaggttgcaa 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaagttgaatgaagtgactcaagaaatcgctgctagaagggagtctctgaaggttgcaa 60
Query: 1532 tggataaggccgagaaagcgcgagaagggaaactgggtgtagaacaagaattgagaaagt 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggataaggccgagaaagcgcgagaagggaaactgggtgtagaacaagaattgagaaagt 120
Query: 1592 ggagggcggaacacgagcaacggagaaaagctgggggaacaaaccagaacatgagttcaa 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagggcggaacacgagcaacggagaaaagctgggggaacaaaccagaacatgagttcaa 180
Query: 1652 atgttagctttgacaggagcaaggaagcttatagctttgaccatgctcataatgcactta 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttagctttgacaggagcaaggaagcttatagctttgaccatgctcataatgcactta 240
Query: 1712 tttctggacattacatgtcgagtccaaaggcttatgtccatgcaaacaatgaaactggat 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttctggacattacatgtcgagtccaaaggcttatgtccatgcaaacaatgaaactggat 300
Query: 1772 cattccgagatacaaaaactggaaagaagaagaagaagtcctttttcccgcgaattttga 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattccgagatacaaaaactggaaagaagaagaagaagtcctttttcccgcgaattttga 360
Query: 1832 tgttctttgcaagnnnnnnntcacatccaacccattcagggtaa 1875
||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 tgttctttgcaagaaaaaaatcacatccaacccattcagggtaa 404
>gnl|LJGI|TC62021 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 823
Score = 214 bits (108), Expect = 1e-54
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 1342 acactttctttggaggagtactataagcttagcaaacaagcccatgaggcagaagagcat 1401
|||||||||||||||||||||||| |||||||||||| || ||||||||||||||||
Sbjct: 5 acactttctttggaggagtactatgagcttagcaaacgggctcatgaggcagaagagcta 64
Query: 1402 gccaatgtgagggttgcagctgccaattctgaaattgagatagctaaggagtctgaattg 1461
|||||| ||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 65 gccaataagagggttgcagatgctaattccgaaattgagatagctaaagagtctgaattg 124
Query: 1462 aaaaccttggagaagttgaatgaagtgactcaagaaatcgctgctagaagggagtctctg 1521
||| | || ||||||||| ||||||||| | ||| || |||||||||||||| ||| ||
Sbjct: 125 aaatcttttgagaagttggatgaagtgaatagagagatagctgctagaagggaatctttg 184
Query: 1522 aaggttgcaatggataaggccgagaaagcgcgagaagggaaactgggtgtagaacaagaa 1581
||| | || ||||| ||||| ||||| || ||||| ||| | |||||||||||||||
Sbjct: 185 aagatagccatggaaaaggctgagaaggcaaaggaaggtaaattaggtgtagaacaagaa 244
Query: 1582 ttgagaaagtggagggcggaacacgagcaacggagaaaagctgg 1625
|| ||||||||||| || ||| | ||||| || ||||| |||||
Sbjct: 245 ttaagaaagtggagagcagaaaatgagcagcgaagaaaggctgg 288
>gnl|LJGI|FS359232 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 510
Score = 60.0 bits (30), Expect = 5e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 208 gaactcgcaaagctcagagtggaagagatggagcaagg 245
||||| ||| ||||||||||||||||||||||||||||
Sbjct: 275 gaacttgcacagctcagagtggaagagatggagcaagg 238