Miyakogusa Predicted Gene

Lj5g3v0279100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0279100.1 CUFF.52697.1
         (340 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320728 similar to UniRef100_O02402 Cluster: Insoluble...   654   0.0  
gnl|LJGI|DC597107 weakly similar to UniRef100_Q4TB69 Cluster: Ch...   408   e-114
gnl|LJGI|TC68038 weakly similar to UniRef100_A7NVU0 Cluster: Chr...   387   e-107

>gnl|LJGI|FS320728 similar to UniRef100_O02402 Cluster: Insoluble protein; n=1;
           Pinctada fucata|Rep: Insoluble protein - Pinctada fucata
           (Pearl oyster), partial (3%)
          Length = 793

 Score =  654 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  aactcactcagtcactctctttccagctcgcgttcgatctcgcgttccaactccgtctcc 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   aactcactcagtcactctctttccagctcgcgttcgatctcgcgttccaactccgtctcc 61

                                                                       
Query: 71  caactcgcgttcctccctctgcggcctgcgccgccacgatcttcacctgctgccgcgccc 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  caactcgcgttcctccctctgcggcctgcgccgccacgatcttcacctgctgccgcgccc 121

                                                                       
Query: 131 ggcgcctccctcctcgcccgtcgtcttcttctcccaagtcccagacacttcagaaatcgg 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggcgcctccctcctcgcccgtcgtcttcttctcccaagtcccagacacttcagaaatcgg 181

                                                                       
Query: 191 aattcagatcctcatcctcgatctctttctctctgggtcagtggtttggttggtacctcc 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aattcagatcctcatcctcgatctctttctctctgggtcagtggtttggttggtacctcc 241

                                                                       
Query: 251 taattctttcaatttcccttggctggtgcctgtgcctggttgctggtttgagatccttaa 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taattctttcaatttcccttggctggtgcctgtgcctggttgctggtttgagatccttaa 301

                                         
Query: 311 tcctcatttcaatattttggacagaatgaa 340
           ||||||||||||||||||||||||||||||
Sbjct: 302 tcctcatttcaatattttggacagaatgaa 331


>gnl|LJGI|DC597107 weakly similar to UniRef100_Q4TB69 Cluster: Chromosome 11 SCAF7190,
           whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 11 SCAF7190, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (6%)
          Length = 498

 Score =  408 bits (206), Expect = e-114
 Identities = 206/206 (100%)
 Strand = Plus / Plus

                                                                       
Query: 37  ctcgcgttcgatctcgcgttccaactccgtctcccaactcgcgttcctccctctgcggcc 96
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctcgcgttcgatctcgcgttccaactccgtctcccaactcgcgttcctccctctgcggcc 60

                                                                       
Query: 97  tgcgccgccacgatcttcacctgctgccgcgcccggcgcctccctcctcgcccgtcgtct 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgcgccgccacgatcttcacctgctgccgcgcccggcgcctccctcctcgcccgtcgtct 120

                                                                       
Query: 157 tcttctcccaagtcccagacacttcagaaatcggaattcagatcctcatcctcgatctct 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcttctcccaagtcccagacacttcagaaatcggaattcagatcctcatcctcgatctct 180

                                     
Query: 217 ttctctctgggtcagtggtttggttg 242
           ||||||||||||||||||||||||||
Sbjct: 181 ttctctctgggtcagtggtttggttg 206


>gnl|LJGI|TC68038 weakly similar to UniRef100_A7NVU0 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 1257

 Score =  387 bits (195), Expect = e-107
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 35  agctcgcgttcgatctcgcgttccaactccgtctcccaactcgcgttcctccctctgcgg 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   agctcgcgttcgatctcgcgttccaactccgtctcccaactcgcgttcctccctctgcgg 61

                                                                       
Query: 95  cctgcgccgccacgatcttcacctgctgccgcgcccggcgcctccctcctcgcccgtcgt 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cctgcgccgccacgatcttcacctgctgccgcgcccggcgcctccctcctcgcccgtcgt 121

                                                                       
Query: 155 cttcttctcccaagtcccagacacttcagaaatcggaattcagatcctcatcctcgatct 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttcttctcccaagtcccagacacttcagaaatcggaattcagatcctcatcctcgatct 181

                          
Query: 215 ctttctctctgggtc 229
           |||||||||||||||
Sbjct: 182 ctttctctctgggtc 196