Miyakogusa Predicted Gene
- Lj5g3v0276960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0276960.1 Non Chatacterized Hit- tr|I3SNK2|I3SNK2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; seg,NULL; no
description,Nucleic a,CUFF.52693.1
(426 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64117 844 0.0
gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome... 92 3e-18
gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosom... 72 3e-12
gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome... 72 3e-12
>gnl|LJGI|TC64117
Length = 759
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 1 atggcgacacagatagaaaagagaaagccagtgtttgtgaaggttgatcaactcaaaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggcgacacagatagaaaagagaaagccagtgtttgtgaaggttgatcaactcaaaccg 147
Query: 61 ggaaccaacggtcacacactcacggtgaaggtggtgagctcgaaacctgtgaaggcggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggaaccaacggtcacacactcacggtgaaggtggtgagctcgaaacctgtgaaggcggtg 207
Query: 121 ggtaaccgagtcggtcggccgtcggtgctagctgctaagcctccccgaatcgccgagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggtaaccgagtcggtcggccgtcggtgctagctgctaagcctccccgaatcgccgagtgc 267
Query: 181 gttgtcggcgatgaaactggaaccatagtcttcaccgctcgcaatgaacaggtggacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gttgtcggcgatgaaactggaaccatagtcttcaccgctcgcaatgaacaggtggacctc 327
Query: 241 atgacgcctgattcaactataatcctgcgtaacgccaagattgacatgttcaagggatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgacgcctgattcaactataatcctgcgtaacgccaagattgacatgttcaagggatcg 387
Query: 301 atgaggctagcagttgatagatggggccgtattgaggtcacggaacctgccaattttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgaggctagcagttgatagatggggccgtattgaggtcacggaacctgccaattttgaa 447
Query: 361 gtgaaagaggagaacaatctttcattagtggaatatgagttggtcaatgtagcagatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtgaaagaggagaacaatctttcattagtggaatatgagttggtcaatgtagcagatgag 507
Query: 421 tgattg 426
||||||
Sbjct: 508 tgattg 513
>gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 842
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 268 cgtaacgccaagattgacatgttcaagggatcgatgaggctagcagttgatagatggggc 327
||||| || |||||||||||||| ||||||||||||||| | || ||||| | |||||||
Sbjct: 378 cgtaatgcaaagattgacatgtttaagggatcgatgaggttggctgttgacaaatggggc 437
Query: 328 cgtattgaggtcacggaacctgccaattttgaagtgaaagaggagaacaa 377
|| |||||||| || |||||||| || || ||||| |||||||| |||||
Sbjct: 438 cgcattgaggttactgaacctgcaaaattcgaagttaaagaggataacaa 487
>gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 693
Score = 71.9 bits (36), Expect = 3e-12
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 268 cgtaacgccaagattgacatgttcaagggatcgatgaggctagcagttgatagatggggc 327
||||| || |||||||||||||| |||||||| || ||||| || ||||| | ||||||
Sbjct: 451 cgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatggggg 392
Query: 328 cgtattgaggtcacggaacctgccaattttgaagtgaaagagga 371
|| ||||| ||||| |||||||| ||||| | ||| ||||||||
Sbjct: 391 cgcattgaagtcactgaacctgcaaatttcgtagttaaagagga 348
>gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 704
Score = 71.9 bits (36), Expect = 3e-12
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 268 cgtaacgccaagattgacatgttcaagggatcgatgaggctagcagttgatagatggggc 327
||||| || |||||||||||||| |||||||| || ||||| || ||||| | ||||||
Sbjct: 334 cgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatggggg 393
Query: 328 cgtattgaggtcacggaacctgccaattttgaagtgaaagagga 371
|| ||||| ||||| |||||||| ||||| | ||| ||||||||
Sbjct: 394 cgcattgaagtcactgaacctgcaaatttcgtagttaaagagga 437