Miyakogusa Predicted Gene
- Lj5g3v0254350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0254350.1 Non Chatacterized Hit- tr|K3Z0S8|K3Z0S8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si020145,62.34,4e-19,Complex1_LYR,Complex 1 LYR protein; FAMILY NOT
NAMED,LYR motif-containing protein 2,CUFF.52670.1
(234 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69703 similar to UniRef100_Q9LQR2 Cluster: T4O12.27; ... 464 e-130
gnl|LJGI|BP036051 similar to UniRef100_Q9LQR2 Cluster: T4O12.27;... 274 2e-73
gnl|LJGI|BP072379 similar to UniRef100_Q9LQR2 Cluster: T4O12.27;... 218 1e-56
gnl|LJGI|DC595568 186 4e-47
>gnl|LJGI|TC69703 similar to UniRef100_Q9LQR2 Cluster: T4O12.27; n=1; Arabidopsis
thaliana|Rep: T4O12.27 - Arabidopsis thaliana (Mouse-ear
cress), partial (95%)
Length = 569
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atggatcttcaggacttccttatccgggctcgagtcttgaagctattccgacaggcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggatcttcaggacttccttatccgggctcgagtcttgaagctattccgacaggcattg 205
Query: 61 agaattgctggtcgagccccttcttctgctagagctgaattgagacagacagttagacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 agaattgctggtcgagccccttcttctgctagagctgaattgagacagacagttagacag 265
Query: 121 gagatggaaaataatcgaaactgcaatgacaagcaaaggattcgttacttgattagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gagatggaaaataatcgaaactgcaatgacaagcaaaggattcgttacttgattagtgat 325
Query: 181 ggattggaaagattgaaacgattggatgaaatgcttgatatgcaaggtcattga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggattggaaagattgaaacgattggatgaaatgcttgatatgcaaggtcattga 379
>gnl|LJGI|BP036051 similar to UniRef100_Q9LQR2 Cluster: T4O12.27; n=1; Arabidopsis
thaliana|Rep: T4O12.27 - Arabidopsis thaliana (Mouse-ear
cress), partial (56%)
Length = 428
Score = 274 bits (138), Expect = 2e-73
Identities = 141/142 (99%)
Strand = Plus / Minus
Query: 93 agctgaattgagacagacagttagacaggagatggaaaataatcgaaactgcaatgacaa 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agctgaattgagacagacagttagacaggagatggaaaataatcgaaactgcaatgacaa 274
Query: 153 gcaaaggattcgttacttgattagtgatggattggaaagattgaaacgattggatgaaat 212
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gccaaggattcgttacttgattagtgatggattggaaagattgaaacgattggatgaaat 214
Query: 213 gcttgatatgcaaggtcattga 234
||||||||||||||||||||||
Sbjct: 213 gcttgatatgcaaggtcattga 192
>gnl|LJGI|BP072379 similar to UniRef100_Q9LQR2 Cluster: T4O12.27; n=1; Arabidopsis
thaliana|Rep: T4O12.27 - Arabidopsis thaliana (Mouse-ear
cress), partial (42%)
Length = 373
Score = 218 bits (110), Expect = 1e-56
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 93 agctgaattgagacagacagttagacaggagatggaaaataatcgaaactgcaatgacaa 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agctgaattgagacagacagttagacaggagatggaaaataatcgaaactgcaatgacaa 95
Query: 153 gcaaaggattcgttacttgattagtgatggattggaaagattgaaacgat 202
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcaaaggattcgttacttgattagtgatggattggaaagattgaaacgat 45
>gnl|LJGI|DC595568
Length = 557
Score = 186 bits (94), Expect = 4e-47
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atggatcttcaggacttccttatccgggctcgagtcttgaagctattccgacaggcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggatcttcaggacttccttatccgggctcgagtcttgaagctattccgacaggcattg 205
Query: 61 agaattgctggtcgagccccttcttctgctagag 94
||||||||||||||||||||||||||||||||||
Sbjct: 206 agaattgctggtcgagccccttcttctgctagag 239