Miyakogusa Predicted Gene
- Lj5g3v0240220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0240220.1 CUFF.52777.1
(798 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325243 similar to UniRef100_A7NSS5 Cluster: Chromosom... 1174 0.0
gnl|LJGI|FS336009 homologue to UniRef100_A7QDT2 Cluster: Chromos... 105 4e-22
gnl|LJGI|TC75236 homologue to UniRef100_A7QDT2 Cluster: Chromoso... 82 6e-15
>gnl|LJGI|FS325243 similar to UniRef100_A7NSS5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 778
Score = 1174 bits (592), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Plus
Query: 1 atgattgcagagggcttcgaagacgaggagaaatggctcgccgaggggatcgccggcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgattgcagagggcttcgaagacgaggagaaatggctcgccgaggggatcgccggcgtt 147
Query: 61 caacacaacgcattcttcctccatcgcgcactggatgacaataatctcagagacgccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 caacacaacgcattcttcctccatcgcgcactggatgacaataatctcagagacgccctc 207
Query: 121 aaatacgcagcgatgatgctatcggagcttcgaacttctcggctctcacctcacaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aaatacgcagcgatgatgctatcggagcttcgaacttctcggctctcacctcacaaatat 267
Query: 181 tatgaactctatatgagagccttcgacgagctcaggaggctcgagatcttcttcaaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatgaactctatatgagagccttcgacgagctcaggaggctcgagatcttcttcaaagac 327
Query: 241 gaaaccagacacggtgttgccattgttgatctctatgagcttgttcagcacgctggaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gaaaccagacacggtgttgccattgttgatctctatgagcttgttcagcacgctggaaat 387
Query: 301 atattgcctagactgtatcttctttgtacggcaggatccgtttacctcagatgtaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atattgcctagactgtatcttctttgtacggcaggatccgtttacctcagatgtaaggat 447
Query: 361 gctcctgtaaaggacgttcttaaagatctagtagaaatgtgccgcagcgttcaacatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gctcctgtaaaggacgttcttaaagatctagtagaaatgtgccgcagcgttcaacatcca 507
Query: 421 attcgtggtctattcttgaggagttacctgtctcaaatcagtagagacaagttgcctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 attcgtggtctattcttgaggagttacctgtctcaaatcagtagagacaagttgcctgat 567
Query: 481 atcggctctgaatatgaaggcggggattctaacggtgtgatggatgcggttgaatttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atcggctctgaatatgaaggcggggattctaacggtgtgatggatgcggttgaatttgtt 627
Query: 541 ctacaaaatttcacagaaatgaataagctttgggttcgattgcagcatcggg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctacaaaatttcacagaaatgaataagctttgggttcgattgcagcatcggg 679
>gnl|LJGI|FS336009 homologue to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 609
Score = 105 bits (53), Expect = 4e-22
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 618 ggaaaaagaaaggaatgagcttcgcgatcttgtagggaagaatctccatgttctcagtca 677
|||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 137 ggaaaaggaaaggagcgagctgcgcgatcttgttgggaagaatctccatgttctcagtca 196
Query: 678 aatagagggagtggaccttgaaatgtataaaga 710
|||||||| || |||||||| ||||| |||||
Sbjct: 197 gatagagggtgttgaccttgagatgtacaaaga 229
>gnl|LJGI|TC75236 homologue to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 762
Score = 81.8 bits (41), Expect = 6e-15
Identities = 191/241 (79%)
Strand = Plus / Plus
Query: 260 ccattgttgatctctatgagcttgttcagcacgctggaaatatattgcctagactgtatc 319
||||| ||||||| ||||| ||||| ||||| |||||||| || |||||| || ||||||
Sbjct: 406 ccattattgatctttatgaacttgtccagcatgctggaaacattttgcctcgattgtatc 465
Query: 320 ttctttgtacggcaggatccgtttacctcagatgtaaggatgctcctgtaaaggacgttc 379
| || ||||| | |||||| || ||| | | || ||||| ||||||| ||||| ||||
Sbjct: 466 tcctctgtacagtaggatctgtatacataaaatccaaggaagctcctgctaaggatgttc 525
Query: 380 ttaaagatctagtagaaatgtgccgcagcgttcaacatccaattcgtggtctattcttga 439
|||| ||||| ||||| ||||| || || |||| || || |||| || || || | |
Sbjct: 526 ttaaggatcttgtagagatgtgtcgtggcattcagcaccctgttcgcggactctttctca 585
Query: 440 ggagttacctgtctcaaatcagtagagacaagttgcctgatatcggctctgaatatgaag 499
| |||||||| |||||| | |||||||| || ||||| ||||| || |||||||||||||
Sbjct: 586 gaagttacctttctcaagttagtagagataaattgccagatattggttctgaatatgaag 645
Query: 500 g 500
|
Sbjct: 646 g 646