Miyakogusa Predicted Gene

Lj5g3v0240210.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0240210.3 Non Chatacterized Hit- tr|I1MY43|I1MY43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.62,0,VACUOLAR
SORTING PROTEIN 35,Vacuolar protein sorting-associated protein 35;
seg,NULL; Vps35,Vacuolar,CUFF.52774.3
         (987 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome...   622   e-178
gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome...    84   2e-15

>gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 1040

 Score =  622 bits (314), Expect = e-178
 Identities = 327/330 (99%), Gaps = 1/330 (0%)
 Strand = Plus / Plus

                                                                       
Query: 659 agcttttaaatgagatcattgaagccctttcttctgtatcatctcctgaactggccctga 718
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   agcttttaaatgagatcattgaagccctttcttctgtatcatctcctgaactggccctga 61

                                                                       
Query: 719 gactgtatctgcaatgtgcggaggctgctaa-tgactgtgaactcgagcctgttgcctat 777
           ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||
Sbjct: 62  gactgtatctgcaatgtgcggaggcttttaaatgactgtgaactcgagcctgttgcctat 121

                                                                       
Query: 778 gaatttttcacacaggcatttgtattatatgaagaagaaattgcggattctaaagctcag 837
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaatttttcacacaggcatttgtattatatgaagaagaaattgcggattctaaagctcag 181

                                                                       
Query: 838 gtaactgcaatacacttaattatcgggactctccagagaatgaacgtctttggtgttgag 897
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtaactgcaatacacttaattatcgggactctccagagaatgaacgtctttggtgttgag 241

                                                                       
Query: 898 aacagggatacgttaacacacaaggccacagggtattcagcaaagcttttgaagaaacct 957
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacagggatacgttaacacacaaggccacagggtattcagcaaagcttttgaagaaacct 301

                                         
Query: 958 gatcagtgccgtgcggtttatgcatgctca 987
           ||||||||||||||||||||||||||||||
Sbjct: 302 gatcagtgccgtgcggtttatgcatgctca 331


>gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 938

 Score = 83.8 bits (42), Expect = 2e-15
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                       
Query: 910 ttaacacacaaggccacagggtattcagcaaagcttttgaagaaacctgatcagtgccgt 969
           ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||| | 
Sbjct: 9   ttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatgcaga 68

                             
Query: 970 gcggtttatgcatgctca 987
           || || ||||||||||||
Sbjct: 69  gccgtgtatgcatgctca 86