Miyakogusa Predicted Gene
- Lj5g3v0240210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0240210.1 Non Chatacterized Hit- tr|I1MY43|I1MY43_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.14,0,Vps35,Vacuolar protein sorting-associated protein 35;
seg,NULL; VACUOLAR SORTING PROTEIN 35,Vacuolar,CUFF.52774.1
(1359 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome... 1344 0.0
gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome... 149 5e-35
>gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1040
Score = 1344 bits (678), Expect = 0.0
Identities = 697/702 (99%), Gaps = 1/702 (0%)
Strand = Plus / Plus
Query: 659 agcttttaaatgagatcattgaagccctttcttctgtatcatctcctgaactggccctga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcttttaaatgagatcattgaagccctttcttctgtatcatctcctgaactggccctga 61
Query: 719 gactgtatctgcaatgtgcggaggctgctaa-tgactgtgaactcgagcctgttgcctat 777
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 62 gactgtatctgcaatgtgcggaggcttttaaatgactgtgaactcgagcctgttgcctat 121
Query: 778 gaatttttcacacaggcatttgtattatatgaagaagaaattgcggattctaaagctcag 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaatttttcacacaggcatttgtattatatgaagaagaaattgcggattctaaagctcag 181
Query: 838 gtaactgcaatacacttaattatcgggactctccagagaatgaacgtctttggtgttgag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtaactgcaatacacttaattatcgggactctccagagaatgaacgtctttggtgttgag 241
Query: 898 aacagggatacgttaacacacaaggccacagggtattcagcaaagcttttgaagaaacct 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacagggatacgttaacacacaaggccacagggtattcagcaaagcttttgaagaaacct 301
Query: 958 gatcagtgccgtgcggtttatgcatgctcacatctcttttgggttgatgatcaagatggt 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatcagtgccgtgcggtttatgcatgctcacatctcttttgggttgatgatcaagatggt 361
Query: 1018 attaaagacggagaaagagtattgctttgccttaagcgtgctttgaggattgcaaatgct 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attaaagacggagaaagagtattgctttgccttaagcgtgctttgaggattgcaaatgct 421
Query: 1078 gctcagcaaatggccaatgttgctaggggtagcagtggtccagtgacgctttttgttgaa 1137
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 422 gctcagcaaatggccaatgttgctaggggtagtagtggtccagtgacgctttttgttgaa 481
Query: 1138 atactgaacaagtacatttactattttgagaaaggaaacccacagatcaccagtgctaat 1197
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 482 atactgaacaagtacatttactattttgagaaaggagacccacagatcaccagtgctaat 541
Query: 1198 atccaggggcttatagaattaatcacgagcgaaatgcagagtgacactgcatcagctctt 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atccaggggcttatagaattaatcacgagcgaaatgcagagtgacactgcatcagctctt 601
Query: 1258 ccagtttcagatgcattctttgccagcacattgaggtacatccaattccaaaaacagaag 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccagtttcagatgcattctttgccagcacattgaggtacatccaattccaaaaacagaag 661
Query: 1318 ggcggtatactgggtgagaaatatgattctatcaaggtataa 1359
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggcggtatactgggtgagaaatatgattctatcaaggtataa 703
>gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 938
Score = 149 bits (75), Expect = 5e-35
Identities = 270/335 (80%)
Strand = Plus / Plus
Query: 910 ttaacacacaaggccacagggtattcagcaaagcttttgaagaaacctgatcagtgccgt 969
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||| |
Sbjct: 9 ttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatgcaga 68
Query: 970 gcggtttatgcatgctcacatctcttttgggttgatgatcaagatggtattaaagacgga 1029
|| || ||||||||||||||||| ||||||||||||||||| ||| || ||||| |||
Sbjct: 69 gccgtgtatgcatgctcacatctgttttgggttgatgatcatgataacatgaaagatgga 128
Query: 1030 gaaagagtattgctttgccttaagcgtgctttgaggattgcaaatgctgctcagcaaatg 1089
|| ||||| | | || || ||||| ||||| || |||||||||||||| || ||||||
Sbjct: 129 gagagagtcctattgtgtctcaagcgggctttaagaattgcaaatgctgcacaacaaatg 188
Query: 1090 gccaatgttgctaggggtagcagtggtccagtgacgctttttgttgaaatactgaacaag 1149
| |||| || | ||||||| || |||||| |||||| |||| ||| ||||||||
Sbjct: 189 acaaatgcagcacgaggtagcaccggatcagtgatgcttttcattgagatattgaacaag 248
Query: 1150 tacatttactattttgagaaaggaaacccacagatcaccagtgctaatatccaggggctt 1209
|| |||||| |||||||| || |||||||| ||||| |||| |||||||||| ||
Sbjct: 249 tatctttacttctttgagaaggggaacccacaaatcacacttgctgatatccagggccta 308
Query: 1210 atagaattaatcacgagcgaaatgcagagtgacac 1244
|| || ||||| | || |||||||| ||||||||
Sbjct: 309 attgagttaattatgaatgaaatgcaaagtgacac 343