Miyakogusa Predicted Gene
- Lj5g3v0238160.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0238160.2 Non Chatacterized Hit- tr|I1MY40|I1MY40_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,68.54,0,seg,NULL;
Conserved domain common to transcription factors TFIIS, elongin A,
CRSP70,Transcription fa,CUFF.52669.2
(3226 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63657 similar to UniRef100_A7P8A2 Cluster: Chromosome... 797 0.0
gnl|LJGI|TC74352 weakly similar to UniRef100_A7P8A2 Cluster: Chr... 597 e-169
gnl|LJGI|BP067027 homologue to UniRef100_A9UUP6 Cluster: Predict... 270 5e-71
>gnl|LJGI|TC63657 similar to UniRef100_A7P8A2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 717
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 2825 cagcaaagtatggatcaggtggcacaattccatacatggttgactcaagaggagctccaa 2884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcaaagtatggatcaggtggcacaattccatacatggttgactcaagaggagctccaa 60
Query: 2885 ttgtgcctcaagttggtgctggtgttggaccttcatcttacactcagcctccatttatta 2944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtgcctcaagttggtgctggtgttggaccttcatcttacactcagcctccatttatta 120
Query: 2945 tgagcatgacagggacacaacttggtttaaatggtgttggaccttcacgtcccaactttg 3004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagcatgacagggacacaacttggtttaaatggtgttggaccttcacgtcccaactttg 180
Query: 3005 atcttaactctggcttgttgattgatggtgggaatagagatgctttggctacaaggccat 3064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcttaactctggcttgttgattgatggtgggaatagagatgctttggctacaaggccat 240
Query: 3065 ttttctttcctgctcagggcagagctatggaggagcagcatgtaaggacccttccacaat 3124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttctttcctgctcagggcagagctatggaggagcagcatgtaaggacccttccacaat 300
Query: 3125 cctcaagttcttcaggggttggtgggaaaagaaaagaaccagacagtagctgggaaacct 3184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcaagttcttcaggggttggtgggaaaagaaaagaaccagacagtagctgggaaacct 360
Query: 3185 atccatttagctacaaacatcagcaacctccgtggaagtagc 3226
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccatttagctacaaacatcagcaacctccgtggaagtagc 402
>gnl|LJGI|TC74352 weakly similar to UniRef100_A7P8A2 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 637
Score = 597 bits (301), Expect = e-169
Identities = 304/305 (99%)
Strand = Plus / Plus
Query: 1 atgactcttgaagatttctttaccttgactgagatgaaagatgggctcacagccccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgactcttgaagatttctttaccttgactgagatgaaagatgggctcacagccccttct 392
Query: 61 cgagtcgaggagttgatctctgcaatgcaaagggagcaagattctgttgttaagaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cgagtcgaggagttgatctctgcaatgcaaagggagcaagattctgttgttaagaatgct 452
Query: 121 ggtgatgcaacaaggcagtgggcatctgttgctagcactattgctgctacagagaacaaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 453 ggtgatgcaacaaggcagtgggcatctgttgctaccactattgctgctacagagaacaaa 512
Query: 181 gattgtcttgatctttttattcaattagatggacttcggtttatcaatagatggttaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gattgtcttgatctttttattcaattagatggacttcggtttatcaatagatggttaaat 572
Query: 241 gatgctcaaaatgttggtttcagtgcaaacgatggcaccattgaagagtcaactaccgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gatgctcaaaatgttggtttcagtgcaaacgatggcaccattgaagagtcaactaccgca 632
Query: 301 atgtt 305
|||||
Sbjct: 633 atgtt 637
>gnl|LJGI|BP067027 homologue to UniRef100_A9UUP6 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (8%)
Length = 492
Score = 270 bits (136), Expect = 5e-71
Identities = 185/201 (92%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 3026 ttgatggtgggaatagagatgctttggctacaaggccatttttctttcctgctcagggca 3085
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 491 ttgatggtgggaatagagatgcattggctggaaggccatttttctttcctgctcaggnca 432
Query: 3086 gagctatggaggagcagcatgtaaggacccttccacaatcctcaagttcttcaggggttg 3145
|||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||
Sbjct: 431 gagctatggaggagca---tgtaaggagctttccacaatcctcaagttcttcagtggtta 375
Query: 3146 gtgggaaaagaaaagaaccagacagtagctgggaaacctatccatttagctacaaacatc 3205
||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 374 gtgggaaaagaaaagaaccagacggtggctgggaaacctatccacctagctacaaacatc 315
Query: 3206 agcaacctccgtggaagtagc 3226
|||||||||| ||||||||||
Sbjct: 314 agcaacctccatggaagtagc 294