Miyakogusa Predicted Gene
- Lj5g3v0238160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0238160.1 Non Chatacterized Hit- tr|I1MY40|I1MY40_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.4,0,seg,NULL;
Conserved domain common to transcription factors TFIIS, elongin A,
CRSP70,Transcription fa,CUFF.52669.1
(2998 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63657 similar to UniRef100_A7P8A2 Cluster: Chromosome... 486 e-136
gnl|LJGI|BP067027 homologue to UniRef100_A9UUP6 Cluster: Predict... 389 e-107
gnl|LJGI|TC74352 weakly similar to UniRef100_A7P8A2 Cluster: Chr... 309 5e-83
>gnl|LJGI|TC63657 similar to UniRef100_A7P8A2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 717
Score = 486 bits (245), Expect = e-136
Identities = 358/395 (90%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 2607 gtatggatcaggtggcacaattccatacatggtggactcaagaggagctccagctgtgcc 2666
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 8 gtatggatcaggtggcacaattccatacatggttgactcaagaggagctccaattgtgcc 67
Query: 2667 tcaagttggggggtcaaccgtcctttcatcttacaatcagcctccatttattatgagcat 2726
||||||||| | | | ||||||||||| ||||||||||||||||||||||||
Sbjct: 68 tcaagttggtgctggtgttggaccttcatcttacactcagcctccatttattatgagcat 127
Query: 2727 gaccgggacacaacttggtttaaatggtgttggatcttcacatccccactttgatcttaa 2786
||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct: 128 gacagggacacaacttggtttaaatggtgttggaccttcacgtcccaactttgatcttaa 187
Query: 2787 ctctggcttcttggttgatggtgggaatagagatgcattggctggaaggccatttttctt 2846
||||||||| ||| |||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 188 ctctggcttgttgattgatggtgggaatagagatgctttggctacaaggccatttttctt 247
Query: 2847 tcctgctcagggcagagctatggagg---agcatgtaaggagctttccacaatcctcaag 2903
|||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 248 tcctgctcagggcagagctatggaggagcagcatgtaaggacccttccacaatcctcaag 307
Query: 2904 ttcttcagtggttagtgggaaaagaaaagaaccagacggtggctgggaaacctatccacc 2963
|||||||| |||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 308 ttcttcaggggttggtgggaaaagaaaagaaccagacagtagctgggaaacctatccatt 367
Query: 2964 tagctacaaacatcagcaacctccatggaagtagc 2998
|||||||||||||||||||||||| ||||||||||
Sbjct: 368 tagctacaaacatcagcaacctccgtggaagtagc 402
>gnl|LJGI|BP067027 homologue to UniRef100_A9UUP6 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (8%)
Length = 492
Score = 389 bits (196), Expect = e-107
Identities = 198/199 (99%)
Strand = Plus / Minus
Query: 2800 gttgatggtgggaatagagatgcattggctggaaggccatttttctttcctgctcagggc 2859
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 gttgatggtgggaatagagatgcattggctggaaggccatttttctttcctgctcaggnc 433
Query: 2860 agagctatggaggagcatgtaaggagctttccacaatcctcaagttcttcagtggttagt 2919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agagctatggaggagcatgtaaggagctttccacaatcctcaagttcttcagtggttagt 373
Query: 2920 gggaaaagaaaagaaccagacggtggctgggaaacctatccacctagctacaaacatcag 2979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gggaaaagaaaagaaccagacggtggctgggaaacctatccacctagctacaaacatcag 313
Query: 2980 caacctccatggaagtagc 2998
|||||||||||||||||||
Sbjct: 312 caacctccatggaagtagc 294
>gnl|LJGI|TC74352 weakly similar to UniRef100_A7P8A2 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 637
Score = 309 bits (156), Expect = 5e-83
Identities = 228/252 (90%)
Strand = Plus / Plus
Query: 1 atgactcttgaggatttctttaccttgactgagatgaaagatgggctcacagcctcttct 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 333 atgactcttgaagatttctttaccttgactgagatgaaagatgggctcacagccccttct 392
Query: 61 cgagtacaggagttgatcactgttatgaaaaaggagcaagattgtgttgttaagaatgct 120
||||| ||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||||
Sbjct: 393 cgagtcgaggagttgatctctgcaatgcaaagggagcaagattctgttgttaagaatgct 452
Query: 121 ggtgatgcaataaggcagtgggctgccgtcgctagcactattgctgctacacagaataaa 180
|||||||||| |||||||||||| | || |||| |||||||||||||||| |||| |||
Sbjct: 453 ggtgatgcaacaaggcagtgggcatctgttgctaccactattgctgctacagagaacaaa 512
Query: 181 gattgtcttgatctttttattcgtttagatggagtttggtacatcaatagatggttaaat 240
|||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||||
Sbjct: 513 gattgtcttgatctttttattcaattagatggacttcggtttatcaatagatggttaaat 572
Query: 241 gatgctcaaaat 252
||||||||||||
Sbjct: 573 gatgctcaaaat 584