Miyakogusa Predicted Gene
- Lj5g3v0228130.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0228130.2 Non Chatacterized Hit- tr|G7I7P5|G7I7P5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,71.58,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; DUF668,Protein of
unkno,CUFF.52649.2
(1386 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79651 similar to UniRef100_A7NSU5 Cluster: Chromosome... 975 0.0
gnl|LJGI|BW598763 similar to UniRef100_A1KA54 Cluster: Two compo... 444 e-124
gnl|LJGI|TC79447 similar to UniRef100_A7NSU5 Cluster: Chromosome... 96 7e-19
gnl|LJGI|CB829048 similar to UniRef100_A7NSU5 Cluster: Chromosom... 94 3e-18
>gnl|LJGI|TC79651 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1114
Score = 975 bits (492), Expect = 0.0
Identities = 503/506 (99%), Gaps = 3/506 (0%)
Strand = Plus / Plus
Query: 884 aaaagaaatccctttggtccagagatttggaggagatagttgaaaagctagttgatattg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagaaatccctttggtccagagatttggaggagatagttgaaaagctagttgatattg 60
Query: 944 ttatccatatacatcaagcaattttggagtatcttggaaattatg---gtacaaccagta 1000
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ttatccatatacatcaagcaattttggagtatcttggaaattatgcaggtacaaccagta 120
Query: 1001 tccagcatagtgagggttctcaaaggcttggtgtagctggtcttgcactgcactatgcta 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccagcatagtgagggttctcaaaggcttggtgtagctggtcttgcactgcactatgcta 180
Query: 1061 atattatcaatcagataaatataattgcatctcgaccaagtgttcttcctccaaacgtaa 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atattatcaatcagataaatataattgcatctcgaccaagtgttcttcctccaaacgtaa 240
Query: 1121 gggacacattgtatcatgggttgcccattagtattaaaaatgttcttccttcacggttac 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggacacattgtatcatgggttgcccattagtattaaaaatgttcttccttcacggttac 300
Query: 1181 aaaatgatgattacacaaaagagctttccattgctcaggtcaaagctgaaatggataaga 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaatgatgattacacaaaagagctttccattgctcaggtcaaagctgaaatggataaga 360
Query: 1241 ttctccagtggcttactccatttgccacaaatacgaccaaagcacatcaaggttttggat 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttctccagtggcttactccatttgccacaaatacgaccaaagcacatcaaggttttggat 420
Query: 1301 gggttggagaatgggcaaatacaagcaatgtgtttggccaaaagaccgccaaagaaagta 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggttggagaatgggcaaatacaagcaatgtgtttggccaaaagaccgccaaagaaagta 480
Query: 1361 acttgattcgcctccagacacttgaa 1386
||||||||||||||||||||||||||
Sbjct: 481 acttgattcgcctccagacacttgaa 506
>gnl|LJGI|BW598763 similar to UniRef100_A1KA54 Cluster: Two component system
transcriptional regulatory protein; n=1; Azoarcus sp.
BH72|Rep: Two component system transcriptional
regulatory protein - Azoarcus sp. (strain BH72), partial
(7%)
Length = 465
Score = 444 bits (224), Expect = e-124
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 1 atggggtcggtttgctcagctggtaaggcagagataaataaaaatggagggaagaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atggggtcggtttgctcagctggtaaggcagagataaataaaaatggagggaagaccttg 301
Query: 61 gggtgtgggggaaagcttgagaaattgaagagctttgttaagaagagcggaggttgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gggtgtgggggaaagcttgagaaattgaagagctttgttaagaagagcggaggttgttat 361
Query: 121 tcaaattcaaagactagtgatcgtggtaaaatggagaagaagcgcaactctacattttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaaattcaaagactagtgatcgtggtaaaatggagaagaagcgcaactctacattttca 421
Query: 181 ggtgaattcaagatatccaatccaagtgaaatggggagaaaaca 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtgaattcaagatatccaatccaagtgaaatggggagaaaaca 465
>gnl|LJGI|TC79447 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 698
Score = 95.6 bits (48), Expect = 7e-19
Identities = 131/158 (82%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 262 gagagggcagtcgaagtcctggacacacttggaagtagcatgcctaagttaaacaccagc 321
|||||||| || ||||| |||||||||||||||||| | ||||| ||||| |||| | ||
Sbjct: 544 gagagggcggtagaagttctggacacacttggaagtggaatgccaaagttgaacagcggc 603
Query: 322 aatgggtttagctctagcatggtggctcctagagggaataaaatatcaatattggcattt 381
| ||||||| |||| ||||| || ||| |||| ||| |||||| ||||||||||||
Sbjct: 604 agtgggtttgtctctggcatgt---cttctaaagggcatagaatatccatattggcattt 660
Query: 382 gaagtagctaatacaataagcaggggagaaattctgtt 419
|||||||||||||| |||| ||| |||| |||| ||||
Sbjct: 661 gaagtagctaatacgataaccagaggagcaattttgtt 698
>gnl|LJGI|CB829048 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 492
Score = 93.7 bits (47), Expect = 3e-18
Identities = 127/153 (83%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 262 gagagggcagtcgaagtcctggacacacttggaagtagcatgcctaagttaaacaccagc 321
|||||||| || ||||| |||||||||||||||||| | ||||| ||||| |||| | ||
Sbjct: 343 gagagggcggtagaagttctggacacacttggaagtggaatgccaaagttgaacagcggc 402
Query: 322 aatgggtttagctctagcatggtggctcctagagggaataaaatatcaatattggcattt 381
| ||||||| |||| ||||| || ||| |||| ||| |||||| ||||||||||||
Sbjct: 403 agtgggtttgtctctggcatgt---cttctaaagggcatagaatatccatattggcattt 459
Query: 382 gaagtagctaatacaataagcaggggagaaatt 414
|||||||||||||| |||| ||| |||| ||||
Sbjct: 460 gaagtagctaatacgataaccagaggagcaatt 492