Miyakogusa Predicted Gene

Lj5g3v0228130.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0228130.1 Non Chatacterized Hit- tr|G7I7P5|G7I7P5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.35,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; DUF3475,Protein of unknown functi,CUFF.52649.1
         (762 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598763 similar to UniRef100_A1KA54 Cluster: Two compo...   444   e-124
gnl|LJGI|TC79447 similar to UniRef100_A7NSU5 Cluster: Chromosome...    96   4e-19
gnl|LJGI|CB829048 similar to UniRef100_A7NSU5 Cluster: Chromosom...    94   2e-18

>gnl|LJGI|BW598763 similar to UniRef100_A1KA54 Cluster: Two component system
           transcriptional regulatory protein; n=1; Azoarcus sp.
           BH72|Rep: Two component system transcriptional
           regulatory protein - Azoarcus sp. (strain BH72), partial
           (7%)
          Length = 465

 Score =  444 bits (224), Expect = e-124
 Identities = 224/224 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggtcggtttgctcagctggtaaggcagagataaataaaaatggagggaagaccttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atggggtcggtttgctcagctggtaaggcagagataaataaaaatggagggaagaccttg 301

                                                                       
Query: 61  gggtgtgggggaaagcttgagaaattgaagagctttgttaagaagagcggaggttgttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gggtgtgggggaaagcttgagaaattgaagagctttgttaagaagagcggaggttgttat 361

                                                                       
Query: 121 tcaaattcaaagactagtgatcgtggtaaaatggagaagaagcgcaactctacattttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaaattcaaagactagtgatcgtggtaaaatggagaagaagcgcaactctacattttca 421

                                                       
Query: 181 ggtgaattcaagatatccaatccaagtgaaatggggagaaaaca 224
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtgaattcaagatatccaatccaagtgaaatggggagaaaaca 465


>gnl|LJGI|TC79447 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 698

 Score = 95.6 bits (48), Expect = 4e-19
 Identities = 131/158 (82%), Gaps = 3/158 (1%)
 Strand = Plus / Plus

                                                                       
Query: 262 gagagggcagtcgaagtcctggacacacttggaagtagcatgcctaagttaaacaccagc 321
           |||||||| || ||||| |||||||||||||||||| | ||||| ||||| |||| | ||
Sbjct: 544 gagagggcggtagaagttctggacacacttggaagtggaatgccaaagttgaacagcggc 603

                                                                       
Query: 322 aatgggtttagctctagcatggtggctcctagagggaataaaatatcaatattggcattt 381
           | |||||||  |||| |||||    || ||| |||| ||| |||||| ||||||||||||
Sbjct: 604 agtgggtttgtctctggcatgt---cttctaaagggcatagaatatccatattggcattt 660

                                                 
Query: 382 gaagtagctaatacaataagcaggggagaaattctgtt 419
           |||||||||||||| |||| ||| |||| |||| ||||
Sbjct: 661 gaagtagctaatacgataaccagaggagcaattttgtt 698


>gnl|LJGI|CB829048 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 492

 Score = 93.7 bits (47), Expect = 2e-18
 Identities = 127/153 (83%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                       
Query: 262 gagagggcagtcgaagtcctggacacacttggaagtagcatgcctaagttaaacaccagc 321
           |||||||| || ||||| |||||||||||||||||| | ||||| ||||| |||| | ||
Sbjct: 343 gagagggcggtagaagttctggacacacttggaagtggaatgccaaagttgaacagcggc 402

                                                                       
Query: 322 aatgggtttagctctagcatggtggctcctagagggaataaaatatcaatattggcattt 381
           | |||||||  |||| |||||    || ||| |||| ||| |||||| ||||||||||||
Sbjct: 403 agtgggtttgtctctggcatgt---cttctaaagggcatagaatatccatattggcattt 459

                                            
Query: 382 gaagtagctaatacaataagcaggggagaaatt 414
           |||||||||||||| |||| ||| |||| ||||
Sbjct: 460 gaagtagctaatacgataaccagaggagcaatt 492