Miyakogusa Predicted Gene
- Lj5g3v0208080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0208080.1 Non Chatacterized Hit- tr|I1JJ83|I1JJ83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21197
PE,40.43,4e-17,Toll,Toll/interleukin-1 receptor homology (TIR) domain;
TIR,Toll/interleukin-1 receptor homology (TI,CUFF.52653.1
(1365 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66376 1031 0.0
gnl|LJGI|GO038316 165 9e-40
gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Ch... 133 3e-30
gnl|LJGI|TC82575 weakly similar to UniRef100_Q8S4X3 Cluster: TIR... 117 2e-25
gnl|LJGI|TC71670 weakly similar to UniRef100_A3QVH0 Cluster: Tol... 96 7e-19
gnl|LJGI|DC593436 UniRef100_A0V011 Cluster: Dihydroxy-acid dehyd... 74 3e-12
gnl|LJGI|FS342219 similar to UniRef100_Q18HV7 Cluster: 3-hydroxy... 72 1e-11
gnl|LJGI|FS320756 56 6e-07
gnl|LJGI|TC59928 weakly similar to UniRef100_A7PQ35 Cluster: Chr... 54 2e-06
gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Ch... 52 9e-06
>gnl|LJGI|TC66376
Length = 677
Score = 1031 bits (520), Expect = 0.0
Identities = 540/549 (98%)
Strand = Plus / Plus
Query: 1 atgatggagcagaatttcaagccttcgttatatctacaagccatctgtgaaatgacggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgatggagcagaatttcaagccttcgttatatctacaagccatctgtgaaatgacggag 188
Query: 61 ctgacttttaagcaaagtgaagagagtaccattgcttctgtattcgaaagttttcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctgacttttaagcaaagtgaagagagtaccattgcttctgtattcgaaagttttcaaaat 248
Query: 121 gaaaaaattgatgaagttgcagagtggataaatgaagtggataaattcttagccgagacc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 249 gaaaaaattgatgaagttgcagagtggataaatgaagcggataaattcttagccgagacc 308
Query: 181 caaccagaatttgaaggtggaactgttaaggcggatcccctttggtgctataacacgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caaccagaatttgaaggtggaactgttaaggcggatcccctttggtgctataacacgata 368
Query: 241 tcaaaaacaaggaagctacgtgccaaacgtggaccaaatttttcttttcgaagagcaagc 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 369 tcaaaaacaaggaagctacgtgccaaacgtggaccaaattcttcttttcgaagagcaagc 428
Query: 301 tcatctcaagatgttggatctgaagatgcggcaccactttctttacgtgaagaactctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcatctcaagatgttggatctgaagatgcggcaccactttctttacgtgaagaactctcc 488
Query: 361 tgtgaactaacgtcgctgcttaacatatattattgtgctcagacgttgtctacttttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgtgaactaacgtcgctgcttaacatatattattgtgctcagacgttgtctacttttgat 548
Query: 421 caagaagataaattcagtgaagatcttgagcagcaaatagatgaattcttaacagggatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 caagaagataaattcagtgaagatcttgagcagcaaatagatgaattcttaacagggatc 608
Query: 481 aaactgctattacaagnnnnnnntcctgagaagaaatctggttggtaccgtcagaagatt 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaactgctattacaagaaaaaaatcctgagaagaaatctggttggtaccgtcagaagatt 668
Query: 541 tcagaaaca 549
|||||||||
Sbjct: 669 tcagaaaca 677
>gnl|LJGI|GO038316
Length = 109
Score = 165 bits (83), Expect = 9e-40
Identities = 92/95 (96%)
Strand = Plus / Minus
Query: 1211 agccatccgttgtgaggcatcaaattaaaagttatggagaagctatgatcaaacatgaaa 1270
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 109 agccatccgttgtgaggcatcaaattaaaagttatggagaaggtatgatcaaacatgaaa 50
Query: 1271 caaggtatggaaatgatgtggtgaggaattggagg 1305
|||||||| ||||||||||||||| ||||||||||
Sbjct: 49 caaggtattgaaatgatgtggtgatgaattggagg 15
>gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 722
Score = 133 bits (67), Expect = 3e-30
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 1039 ggggactccatttcacaagttctcatgggggcaattgaaaactcaaaactttcaattatt 1098
||||||||||||||| | || ||| || ||||||||||| ||||||||||||||||||
Sbjct: 371 ggggactccatttcaaacgtcatcacggccgcaattgaaaattcaaaactttcaattatt 430
Query: 1099 attttctctaaaaactttgcagactccccctggtgtctcgatgaagttgtaaagattctt 1158
||||||||| |||| |||||||||||| |||||||||| ||||| |||| ||||||||
Sbjct: 431 attttctctcaaaattttgcagactccacctggtgtcttgatgagcttgtgaagattctc 490
Query: 1159 gagtgcaaacaaaagaagaatcaactagtttggcc 1193
||||||| | | || ||||||||| || |||||||
Sbjct: 491 gagtgcagagagaacaagaatcaattaatttggcc 525
Score = 61.9 bits (31), Expect = 1e-08
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 799 attcctgaaaagaattttgattggtacaataacaagatagcagaaacaaggatgctgatt 858
|||||| |||||| || |||||||||| |||||||| |||||||||||||| || |||
Sbjct: 2 attcctaaaaagagttctgattggtaccgtaacaagacagcagaaacaaggacactaatt 61
Query: 859 gtcaaacgttattcagaatttcccctccgatctca 893
|||| | |||| ||| ||||||| ||| ||||||
Sbjct: 62 gtcacaaattatccagcatttcccttcccatctca 96
>gnl|LJGI|TC82575 weakly similar to UniRef100_Q8S4X3 Cluster:
TIR-similar-domain-containing protein TSDC; n=1; Pisum
sativum|Rep: TIR-similar-domain-containing protein TSDC -
Pisum sativum (Garden pea), partial (15%)
Length = 886
Score = 117 bits (59), Expect = 2e-25
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 1129 tggtgtctcgatgaagttgtaaagattcttgagtgcaaacaaaagaagaatcaactagtt 1188
||||||||||| |||||||| || |||||||||||||| || ||||| |||||||||||
Sbjct: 2 tggtgtctcgaggaagttgttaaaattcttgagtgcaagcagaagaatgatcaactagtt 61
Query: 1189 tggcctgtcttttataagttggagccatccgttgtgaggcatcaaattaaaagttatgga 1248
||||| |||||||||| | ||||| || | ||||||||||| | || ||||||| |
Sbjct: 62 tggccaatcttttataaagtagagccctcagacgtgaggcatcagagaaatagttatgaa 121
Query: 1249 gaagctatgatcaaacatgaaacaaggtatggaaa 1283
|||||||||||||||| |||||||| ||||||||
Sbjct: 122 aaagctatgatcaaacaagaaacaagatatggaaa 156
>gnl|LJGI|TC71670 weakly similar to UniRef100_A3QVH0 Cluster: Toll interleukin
receptor; n=1; Phaseolus vulgaris|Rep: Toll interleukin
receptor - Phaseolus vulgaris (Kidney bean) (French
bean), partial (19%)
Length = 558
Score = 95.6 bits (48), Expect = 7e-19
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 1153 attcttgagtgcaaacaaaagaagaatcaactagtttggcctgtcttttataagttggag 1212
|||||||||||||| || ||||| |||||||||||||||| |||||||||| | |||
Sbjct: 16 attcttgagtgcaancagaagaatgatcaactagtttggcccatcttttataaagtagag 75
Query: 1213 ccatccgttgtgaggcatcaaattaaaagttatggagaagctatgatcaaacatgaaaca 1272
|| || | ||||||||||| | || ||||||| | |||||||||||||||| ||||||
Sbjct: 76 ccctcagacgtgaggcatcagagaaatagttatgaaaaagctatgatcaaacaagaaaca 135
Query: 1273 aggtatggaaa 1283
|| ||||||||
Sbjct: 136 agatatggaaa 146
>gnl|LJGI|DC593436 UniRef100_A0V011 Cluster: Dihydroxy-acid dehydratase; n=1;
Clostridium cellulolyticum H10|Rep: Dihydroxy-acid,
partial (1%)
Length = 580
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 108 aagttttcaaaatgaaaaaattgatgaagttgcagagtggataaatgaagtggataaatt 167
||||| ||||||||||||| ||||||| | || ||||||||||||||||||||||||||
Sbjct: 452 aagttatcaaaatgaaaaatttgatgacgctgtggagtggataaatgaagtggataaatt 511
Query: 168 c 168
|
Sbjct: 512 c 512
>gnl|LJGI|FS342219 similar to UniRef100_Q18HV7 Cluster: 3-hydroxyacyl-CoA
dehydrogenase; n=1; Haloquadratum walsbyi DSM 16790|Rep:
3-hydroxyacyl-CoA dehydrogenase - Haloquadratum walsbyi
(strain DSM 16790), partial (6%)
Length = 700
Score = 71.9 bits (36), Expect = 1e-11
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 773 agatcaaactgcaattagtagaaaaaattcctgaaaagaattttgattggtacaataaca 832
|||||||||||| |||| || |||||||||||| | ||||||| |||||||| |||||
Sbjct: 577 agatcaaactgcgattacaaggaaaaattcctgagacgaatttttattggtaccgtaaca 636
Query: 833 agatagcagaaacaag 848
||||||||||| ||||
Sbjct: 637 agatagcagaagcaag 652
>gnl|LJGI|FS320756
Length = 790
Score = 56.0 bits (28), Expect = 6e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 773 agatcaaactgcaattagtagaaaaaattcctgaaaagaattttgattggtacaataaca 832
||||||||| ||||||| |||||||||||| |||| |||| || ||||||| || | |
Sbjct: 607 agatcaaacggcaattacaagaaaaaattccggaaacaaattctggttggtaccatgaga 666
Query: 833 agatagcagaaacaag 848
||||||||||| ||||
Sbjct: 667 agatagcagaagcaag 682
>gnl|LJGI|TC59928 weakly similar to UniRef100_A7PQ35 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 1253
Score = 54.0 bits (27), Expect = 2e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 1087 ctttcaattattattttctctaaaaactttgcagactccccctggtgtctcgatgaagtt 1146
||||| ||| ||||||| ||| |||||| |||||| ||| |||||||||||| ||| ||
Sbjct: 747 ctttcgattgttattttgtctgaaaactatgcagagtccagctggtgtctcgaagaactt 806
Query: 1147 gtaaagattcttgagtgca 1165
| ||||||||||| ||||
Sbjct: 807 atcaagattcttgactgca 825
>gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 817
Score = 52.0 bits (26), Expect = 9e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 1059 tctcatgggggcaattgaaaactcaaaactttcaattattattttctctaaaaactttgc 1118
|||| ||| |||||||||||| || | ||||||||| || |||||||| |||||| ||
Sbjct: 728 tctcctggaggcaattgaaaaatcgaggctttcaattgttgttttctctgaaaactatgg 787
Query: 1119 agactccccctggtgtctcgatgaagttgt 1148
| ||||| | |||||||| |||||| ||||
Sbjct: 788 atactccacatggtgtcttgatgaatttgt 817