Miyakogusa Predicted Gene

Lj5g3v0196880.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0196880.1 Non Chatacterized Hit- tr|K4CYX1|K4CYX1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.91,0.000000000000001,MBD02 (METHYL-CPG-BINDING DOMAIN 2),
DNA BINDING,NULL; FAMILY NOT NAMED,NULL; zf-CW,Zinc finger,
CW-,NODE_55981_length_1550_cov_57.864517.path2.1
         (1035 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72771 homologue to UniRef100_A7R4F2 Cluster: Chromoso...   846   0.0  
gnl|LJGI|TC79742 similar to UniRef100_Q12K73 Cluster: Metal-bind...   283   1e-75

>gnl|LJGI|TC72771 homologue to UniRef100_A7R4F2 Cluster: Chromosome undetermined
           scaffold_675, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_675,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 685

 Score =  846 bits (427), Expect = 0.0
 Identities = 433/435 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcatcctcgtaagttttttcttacacccaagaatcaagtcaaggagaatgaaatgcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgcatcctcgtaagttttttcttacacccaagaatcaagtcaaggagaatgaaatgcat 310

                                                                       
Query: 61  cctcgtaaatttttcctttcacccaagaatcaagttgaggacctaacaggttccagttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cctcgtaaatttttcctttcacccaagaatcaagttgaggacctaacaggttccagttgt 370

                                                                       
Query: 121 accagtcaccaacaaagctgtctaccagatccaatatatgtttcttcttcatcgtcagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accagtcaccaacaaagctgtctaccagatccaatatatgtttcttcttcatcgtcagat 430

                                                                       
Query: 181 gatgaaaatgacctgcctaatgatgatgatgcatctaaacaactggtcctttatgaccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gatgaaaatgacctgcctaatgatgatgatgcatctaaacaactggtcctttatgaccct 490

                                                                       
Query: 241 gccagcaatgaaaacaacaaaattgaacttgctcctggtcctcttcctctacagtgtgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gccagcaatgaaaacaacaaaattgaacttgctcctggtcctcttcctctacagtgtgaa 550

                                                                       
Query: 301 ccacctccattgcttgatttacttccaagaagtaaaccttcgaggtcagttcctagagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 551 ccacctccattgcttgatttacttccaagaagtaaaccttcgaggtcagttcctaaagtt 610

                                                                       
Query: 361 ttgccatcagtcggtgctttcactgttcagtgtgcatcctgctttaaatggaggttgatt 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgccatcagtcggtgctttcactgctcagtgtgcatcctgctttaaatggaggttgatt 670

                          
Query: 421 ccaacaaaggaaaaa 435
           |||||||||||||||
Sbjct: 671 ccaacaaaggaaaaa 685



 Score = 61.9 bits (31), Expect = 7e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 53  aaatgcatcctcgtaaatttttcctttcacccaagaatcaagt 95
           |||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 249 aaatgcatcctcgtaagttttttcttacacccaagaatcaagt 291


>gnl|LJGI|TC79742 similar to UniRef100_Q12K73 Cluster: Metal-binding protein; n=1;
            Shewanella denitrificans OS217|Rep: Metal-binding protein
            - Shewanella denitrificans (strain OS217 / ATCC BAA-1090
            / DSM 15013), partial (12%)
          Length = 414

 Score =  283 bits (143), Expect = 1e-75
 Identities = 146/147 (99%)
 Strand = Plus / Plus

                                                                        
Query: 889  ggtccagaagactctgctaattctgatgaggacagatcagggattcccgctccattcttc 948
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggtccagaagactctgctaattctgatgaggacagatcagggattcccgctccattcttc 60

                                                                        
Query: 949  gggtcggatgtttttgaccctatcagccgtcctacaaagaagagaacagtacagaagcaa 1008
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61   gggtcggatgtttttgaccctatcagccgtcctacaaagaagagaacagtacagaagcca 120

                                       
Query: 1009 agttccttccaaaatgatgccctatag 1035
            |||||||||||||||||||||||||||
Sbjct: 121  agttccttccaaaatgatgccctatag 147