Miyakogusa Predicted Gene

Lj5g3v0196840.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0196840.1 Non Chatacterized Hit- tr|B9S1E4|B9S1E4_RICCO
Auxin response factor, putative OS=Ricinus communis GN,51.72,2e-18,
,BW633246.path2.1
         (351 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW633246 similar to UniRef100_A7PFD6 Cluster: Chromosom...   696   0.0  

>gnl|LJGI|BW633246 similar to UniRef100_A7PFD6 Cluster: Chromosome chr11 scaffold_14,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_14, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 460

 Score =  696 bits (351), Expect = 0.0
 Identities = 351/351 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttaggagatgacatggctcagtctgctgccacaatcttgagttcaagtgccttagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgttaggagatgacatggctcagtctgctgccacaatcttgagttcaagtgccttagaa 167

                                                                       
Query: 61  actgtgtcatcaaacgcaaatttgttgaaagatttgcacccccactctgaagttaaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 actgtgtcatcaaacgcaaatttgttgaaagatttgcacccccactctgaagttaaggct 227

                                                                       
Query: 121 tctctcaacatttcaaaaaatcagaatcaaggaaattttgtttctcagacatacttgaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tctctcaacatttcaaaaaatcagaatcaaggaaattttgtttctcagacatacttgaat 287

                                                                       
Query: 181 agtggagctgccccgacagattgtttggatacatcatcttctacatcagtttgtctgtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agtggagctgccccgacagattgtttggatacatcatcttctacatcagtttgtctgtct 347

                                                                       
Query: 241 cagaatgatgttcacatgcatcagattaacaacccattatcttacaatccacagtctatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cagaatgatgttcacatgcatcagattaacaacccattatcttacaatccacagtctatg 407

                                                              
Query: 301 ttctttagagacaatagtcgagatggggaagttcaggcagatggtaggagc 351
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttctttagagacaatagtcgagatggggaagttcaggcagatggtaggagc 458