Miyakogusa Predicted Gene
- Lj5g3v0186700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0186700.1 CUFF.52635.1
(1800 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80546 weakly similar to UniRef100_UPI000050FD8B Clust... 1871 0.0
gnl|LJGI|TC65164 similar to UniRef100_Q9LR13 Cluster: F10A5.7; n... 870 0.0
gnl|LJGI|AV779044 similar to UniRef100_Q9LR13 Cluster: F10A5.7; ... 430 e-119
gnl|LJGI|TC68592 weakly similar to UniRef100_A7PCY5 Cluster: Chr... 78 2e-13
>gnl|LJGI|TC80546 weakly similar to UniRef100_UPI000050FD8B Cluster: COG0803: ABC-type
metal ion transport system, periplasmic component/surface
adhesin; n=1; Brevibacterium linens BL2|Rep: COG0803:
ABC-type metal ion transport system, periplasmic
component/surface adhesin - Brevibacterium linens BL2,
partial (6%)
Length = 1035
Score = 1871 bits (944), Expect = 0.0
Identities = 944/944 (100%)
Strand = Plus / Plus
Query: 857 gtgcctccaaacatgatatgatagaaacttcaacttgttcttctagtgggaagatttctg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcctccaaacatgatatgatagaaacttcaacttgttcttctagtgggaagatttctg 60
Query: 917 aagttgctactcacaaaagatcatggaagaggtgtgcagctcatgtccacattagtcatt 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagttgctactcacaaaagatcatggaagaggtgtgcagctcatgtccacattagtcatt 120
Query: 977 acatcaagagtttagaggtgccaaaaggacaagttatcaaggaacctgagatttatgaat 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acatcaagagtttagaggtgccaaaaggacaagttatcaaggaacctgagatttatgaat 180
Query: 1037 gtcatcaaatgagagcacatgaaggatcaaagcatggagttcttttggaagtacatagct 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcatcaaatgagagcacatgaaggatcaaagcatggagttcttttggaagtacatagct 240
Query: 1097 tgaacagaatgagaaatggagttccttctgctactgtgaggaaccctcaagaaagccaga 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaacagaatgagaaatggagttccttctgctactgtgaggaaccctcaagaaagccaga 300
Query: 1157 actgtattcttcagcagcagtgtcattatggtgacatatcactggctgctccaacaactg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actgtattcttcagcagcagtgtcattatggtgacatatcactggctgctccaacaactg 360
Query: 1217 aggtgtatggtacacaaaagcagcaaagtttcaacttcttgtcgttgtcagttggaagtg 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtgtatggtacacaaaagcagcaaagtttcaacttcttgtcgttgtcagttggaagtg 420
Query: 1277 atgggttaaaggttgacaataattacaataaaattgagccattgtcaaagtttcaagtgc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgggttaaaggttgacaataattacaataaaattgagccattgtcaaagtttcaagtgc 480
Query: 1337 cttatttgcagtcactagcacagcagtatggggtcatgccacttcatagtcagtatgcct 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttatttgcagtcactagcacagcagtatggggtcatgccacttcatagtcagtatgcct 540
Query: 1397 cgacttcttaccaaactcagctttcagttgcagctccacaggttcggttgcagcaacctc 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgacttcttaccaaactcagctttcagttgcagctccacaggttcggttgcagcaacctc 600
Query: 1457 attataatggtagcatgatacgtggaactcaatatagttcaacagtctcaagtaaacaag 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attataatggtagcatgatacgtggaactcaatatagttcaacagtctcaagtaaacaag 660
Query: 1517 agcagcaaaacttttggggggtgcaacaagcagctcaatccaggtctgctgtgaattgca 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcagcaaaacttttggggggtgcaacaagcagctcaatccaggtctgctgtgaattgca 720
Query: 1577 atattattaggacccaatatcctaattggcaaagtggaaggaaccatcactcttctgcag 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atattattaggacccaatatcctaattggcaaagtggaaggaaccatcactcttctgcag 780
Query: 1637 ggagtccatgtgtccaagcaatcattccccatttccctgcttcacaagaaatatttggat 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggagtccatgtgtccaagcaatcattccccatttccctgcttcacaagaaatatttggat 840
Query: 1697 ccaagattacttcaatttcaatctctgggaaacagcagcatcagcagctcattcccccca 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccaagattacttcaatttcaatctctgggaaacagcagcatcagcagctcattcccccca 900
Query: 1757 tccaagacaggtgggctagacctacctctcctttttgtttgtga 1800
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tccaagacaggtgggctagacctacctctcctttttgtttgtga 944
>gnl|LJGI|TC65164 similar to UniRef100_Q9LR13 Cluster: F10A5.7; n=1; Arabidopsis
thaliana|Rep: F10A5.7 - Arabidopsis thaliana (Mouse-ear
cress), partial (3%)
Length = 776
Score = 870 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Plus
Query: 1 atggggtacaatgtttctgaagaacaagcacacgaccaaccttcttcttccactgtcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atggggtacaatgtttctgaagaacaagcacacgaccaaccttcttcttccactgtcagc 393
Query: 61 aagagatttaagattccaaagaattttttgaatggctgcaatggtgttcatcatgctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aagagatttaagattccaaagaattttttgaatggctgcaatggtgttcatcatgctgtt 453
Query: 121 gttccacggaagatacgttcagctatgaagaagcgaaatcgcgaatccatcttacttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gttccacggaagatacgttcagctatgaagaagcgaaatcgcgaatccatcttacttgat 513
Query: 181 tcagaaaaggtgaaccataagatcagtggaacagaatctacaggaaaggatagtgtaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcagaaaaggtgaaccataagatcagtggaacagaatctacaggaaaggatagtgtaaag 573
Query: 241 aagtccaaaaagaaacaaagaattaacccagattggtccccaagaggagtttctgtttct 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 574 aagtccaaaaagaaacaaagaattaacccagattggtccccaagaggagtgtctgtttct 633
Query: 301 gggcctatcacaaaagatgaagaagaggttgcagagactctgtttgccttggctggaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gggcctatcacaaaagatgaagaagaggttgcagagactctgtttgccttggctggaatg 693
Query: 361 tttcataacaatggctccaaacataatgttgaaggatttgaaggacttcaaggagaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tttcataacaatggctccaaacataatgttgaaggatttgaaggacttcaaggagaacca 753
Query: 421 atgccagagaactccacagtttt 443
|||||||||||||||||||||||
Sbjct: 754 atgccagagaactccacagtttt 776
>gnl|LJGI|AV779044 similar to UniRef100_Q9LR13 Cluster: F10A5.7; n=1; Arabidopsis
thaliana|Rep: F10A5.7 - Arabidopsis thaliana (Mouse-ear
cress), partial (4%)
Length = 533
Score = 430 bits (217), Expect = e-119
Identities = 232/237 (97%)
Strand = Plus / Plus
Query: 1 atggggtacaatgtttctgaagaacaagcacacgaccaaccttcttcttccactgtcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atggggtacaatgtttctgaagaacaagcacacgaccaaccttcttcttccactgtcagc 356
Query: 61 aagagatttaagattccaaagaattttttgaatggctgcaatggtgttcatcatgctgtt 120
||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 357 aagagatttaagattccaaagaattttgggaatggctgcgagggtgttcatcatgctgtt 416
Query: 121 gttccacggaagatacgttcagctatgaagaagcgaaatcgcgaatccatcttacttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gttccacggaagatacgttcagctatgaagaagcgaaatcgcgaatccatcttacttgat 476
Query: 181 tcagaaaaggtgaaccataagatcagtggaacagaatctacaggaaaggatagtgta 237
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcagagaaggtgaaccataagatcagtggaacagaatctacaggaaaggatagtgta 533
>gnl|LJGI|TC68592 weakly similar to UniRef100_A7PCY5 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 1066
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 937 tcatggaagaggtgtgcagctcatgtccacattagtcattacatcaagagtttagaggtg 996
|||||||||| ||||||||||||||| ||||| |||||| |||| |||||||||||||
Sbjct: 113 tcatggaagaagtgtgcagctcatgttcacatcagtcatctcatccggagtttagaggtg 172
Query: 997 ccaaaaggaca 1007
||||| |||||
Sbjct: 173 ccaaatggaca 183
Score = 61.9 bits (31), Expect = 1e-08
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 1432 ccacaggttcggttgcagcaacctcattataatggtagcatgatacgtggaactcaatat 1491
||||||||||| |||||||||||||||||| |||| | | || |||||||||||||
Sbjct: 626 ccacaggttcgattgcagcaacctcattattatggcaccccattatgtggaactcaatac 685
Query: 1492 agttcaacagtctcaagtaaacaagagcagcaaaacttttggg 1534
|||||||||| ||| ||||||| |||| | || ||||||||
Sbjct: 686 agttcaacagcttcatataaacaacagcaaccaagcttttggg 728