Miyakogusa Predicted Gene
- Lj5g3v0175620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0175620.1 Non Chatacterized Hit- tr|D8RUS7|D8RUS7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,55,7e-19,seg,NULL; TB2_DP1_HVA22,TB2/DP1/HVA22-related protein;
HVA22-LIKE PROTEIN,NULL; HVA22-LIKE PROTEINS,,CUFF.52622.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67680 similar to UniRef100_A7NSW8 Cluster: Chromosome... 880 0.0
gnl|LJGI|TC73819 similar to UniRef100_A7NSW8 Cluster: Chromosome... 111 4e-24
gnl|LJGI|TC73455 similar to UniRef100_A7NSW8 Cluster: Chromosome... 111 4e-24
>gnl|LJGI|TC67680 similar to UniRef100_A7NSW8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 1458
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1 atgtacagtgaagctaagttgctctttttcatatttctgtggtacccaaaaacaaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atgtacagtgaagctaagttgctctttttcatatttctgtggtacccaaaaacaaaggga 525
Query: 61 acaacatatgtgtatgactccttctttagaccgtatgttgcaaaacatgagccagagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 acaacatatgtgtatgactccttctttagaccgtatgttgcaaaacatgagccagagatc 585
Query: 121 gatcgcaacttgttggagctaagaacaagggcaggagatattgcagttctgtattggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gatcgcaacttgttggagctaagaacaagggcaggagatattgcagttctgtattggcaa 645
Query: 181 agagcttttagttatggtcagaccagaatatatgacattctgcagtttgttgcagcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agagcttttagttatggtcagaccagaatatatgacattctgcagtttgttgcagcacaa 705
Query: 241 tcaacaccaacaactcgccctgctcagaaaccacagcaacgaccaggtgtgagggtccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tcaacaccaacaactcgccctgctcagaaaccacagcaacgaccaggtgtgagggtccgt 765
Query: 301 caacctgcacctggtaaaggtccatctgctgctgcaacaggaccgaatgttgaggaacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 caacctgcacctggtaaaggtccatctgctgctgcaacaggaccgaatgttgaggaacct 825
Query: 361 ccatctcctacctctagcacatcctctagtcagttccagaaagaggtagcagaggaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ccatctcctacctctagcacatcctctagtcagttccagaaagaggtagcagaggaattg 885
Query: 421 ggttcaccacaagtgcctaaagca 444
||||||||||||||||||||||||
Sbjct: 886 ggttcaccacaagtgcctaaagca 909
>gnl|LJGI|TC73819 similar to UniRef100_A7NSW8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 509
Score = 111 bits (56), Expect = 4e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 1 atgtacagtgaagctaagttgctctttttcatatttctgtggtacccaaaaacaaaggga 60
||||| |||||| |||||||| ||||| |||| |||||||||||| ||||||||||||
Sbjct: 415 atgtatagtgaaactaagttggcgttttttatatatctgtggtacccgaaaacaaaggga 474
Query: 61 acaacatatgtgtatgactccttctttagacc 92
||||||||||||||||| ||||||||||||||
Sbjct: 475 acaacatatgtgtatgattccttctttagacc 506
>gnl|LJGI|TC73455 similar to UniRef100_A7NSW8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 498
Score = 111 bits (56), Expect = 4e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 1 atgtacagtgaagctaagttgctctttttcatatttctgtggtacccaaaaacaaaggga 60
||||| |||||| |||||||| ||||| |||| |||||||||||| ||||||||||||
Sbjct: 405 atgtatagtgaaactaagttggcgttttttatatatctgtggtacccgaaaacaaaggga 464
Query: 61 acaacatatgtgtatgactccttctttagacc 92
||||||||||||||||| ||||||||||||||
Sbjct: 465 acaacatatgtgtatgattccttctttagacc 496