Miyakogusa Predicted Gene
- Lj5g3v0144400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0144400.1 tr|F4WWA3|F4WWA3_ACREC Protein C20orf11
OS=Acromyrmex echinatior GN=G5I_10218 PE=4
SV=1,36.2,3e-19,CLTH,CTLH/CRA C-terminal to LisH motif domain;
LISH,LisH dimerisation motif; CTLH,CTLH, C-terminal L,CUFF.52637.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57462 similar to UniRef100_A7NT43 Cluster: Chromosome... 1148 0.0
gnl|LJGI|BW597356 similar to UniRef100_A7NT43 Cluster: Chromosom... 676 0.0
>gnl|LJGI|TC57462 similar to UniRef100_A7NT43 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1023
Score = 1148 bits (579), Expect = 0.0
Identities = 595/603 (98%)
Strand = Plus / Plus
Query: 1 atggaacctgatcctcgtcaatacgagaagatcgctattaatgaaaaagacatccccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atggaacctgatcctcgtcaatacgagaagatcgctattaatgaaaaagacatccccaat 150
Query: 61 attgttctgtcatatcttatacataattgctatgaagagtcagtggaatcattcatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 attgttctgtcatatcttatacataattgctatgaagagtcagtggaatcattcatttca 210
Query: 121 tgcactgggattaagaagcctgcagattatttggaaaacatggagaaaagnnnnnnnntc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 211 tgcactgggattaagaagcctgcagattatttggaaaacatggagaaaagaaaaaaaatc 270
Query: 181 tttcactatgcactggagagaaatgcacttaaggctattgagctaacagaacagctggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tttcactatgcactggagagaaatgcacttaaggctattgagctaacagaacagctggca 330
Query: 241 aaggatattctagaaaacaataaggatttgctgtttgatcttctaagccttcattttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaggatattctagaaaacaataaggatttgctgtttgatcttctaagccttcattttgta 390
Query: 301 gagcttgtccgctctaggaaatgcacagaagctttggaatttgctcagaccaagttgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagcttgtccgctctaggaaatgcacagaagctttggaatttgctcagaccaagttgagc 450
Query: 361 ccttttggaaaggagcaaaaatatatgcaaaaccttgaagattttatggcccttcttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ccttttggaaaggagcaaaaatatatgcaaaaccttgaagattttatggcccttcttgct 510
Query: 421 tatcaggagccagagaaatccccagtgtttcatttgcttagcccagagtatcgtcaacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tatcaggagccagagaaatccccagtgtttcatttgcttagcccagagtatcgtcaacag 570
Query: 481 gttgcagatagattgaatcgagctattcttgcatactttaaccttcccagccacacagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gttgcagatagattgaatcgagctattcttgcatactttaaccttcccagccacacagca 630
Query: 541 atggagaggctgatacagcagacgacagtagttagacagtgcttaagtcaggaggctgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atggagaggctgatacagcagacgacagtagttagacagtgcttaagtcaggaggctgga 690
Query: 601 aag 603
|||
Sbjct: 691 aag 693
>gnl|LJGI|BW597356 similar to UniRef100_A7NT43 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 484
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Plus
Query: 179 tctttcactatgcactggagagaaatgcacttaaggctattgagctaacagaacagctgg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tctttcactatgcactggagagaaatgcacttaaggctattgagctaacagaacagctgg 203
Query: 239 caaaggatattctagaaaacaataaggatttgctgtttgatcttctaagccttcattttg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 caaaggatattctagaaaacaataaggatttgctgtttgatcttctaagccttcattttg 263
Query: 299 tagagcttgtccgctctaggaaatgcacagaagctttggaatttgctcagaccaagttga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagagcttgtccgctctaggaaatgcacagaagctttggaatttgctcagaccaagttga 323
Query: 359 gcccttttggaaaggagcaaaaatatatgcaaaaccttgaagattttatggcccttcttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcccttttggaaaggagcaaaaatatatgcaaaaccttgaagattttatggcccttcttg 383
Query: 419 cttatcaggagccagagaaatccccagtgtttcatttgcttagcccagagtatcgtcaac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttatcaggagccagagaaatccccagtgtttcatttgcttagcccagagtatcgtcaac 443
Query: 479 aggttgcagatagattgaatcgagctattcttgcatacttt 519
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggttgcagatagattgaatcgagctattcttgcatacttt 484