Miyakogusa Predicted Gene
- Lj5g3v0133240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0133240.1 Non Chatacterized Hit- tr|G3R353|G3R353_GORGO
Uncharacterized protein OS=Gorilla gorilla gorilla
GN=,27.2,8e-19,TRAM_LAG1_CLN8,TRAM/LAG1/CLN8 homology domain; TRAM,
LAG1 and CLN8 homology domains.,TRAM/LAG1/CLN8
,NODE_53020_length_1233_cov_40.281429.path1.1
(738 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57515 similar to UniRef100_A7NT67 Cluster: Chromosome... 1447 0.0
gnl|LJGI|TC69246 similar to UniRef100_A7NT67 Cluster: Chromosome... 1174 0.0
>gnl|LJGI|TC57515 similar to UniRef100_A7NT67 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1037
Score = 1447 bits (730), Expect = 0.0
Identities = 736/738 (99%)
Strand = Plus / Plus
Query: 1 atggaagactacattacaaagatcatagttgttggggttgtttcatggacaacagccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atggaagactacattacaaagatcatagttgttggggttgtttcatggacaacagccttt 89
Query: 61 gtcctagtaagaagaatctttcccaaacgcacctttgatttctccaaccgcattgtctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gtcctagtaagaagaatctttcccaaacgcacctttgatttctccaaccgcattgtctct 149
Query: 121 acaatccatgcaactttagcagtaacattggcttccctttctgtcgaagattggaagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 acaatccatgcaactttagcagtaacattggcttccctttctgtcgaagattggaagtgt 209
Query: 181 ccaatttgtcctgtggcctcaaaatcttcccatccaaagatgcaagttctggcagtgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ccaatttgtcctgtggcctcaaaatcttcccatccaaagatgcaagttctggcagtgagc 269
Query: 241 ctttcttacctcatttatgatttagtgtgttgtctctttgatggaagagtcaatatggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctttcttacctcatttatgatttagtgtgttgtctctttgatggaagagtcaatatggac 329
Query: 301 aacaccatccaccatttggtgagcattgttggaattggagcaggtctttattatcaaaag 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aataccatccaccatttggtgagcattgttggaattggagcaggtctttattatcaaaag 389
Query: 361 tgtgggtcagaaatggtggcggcattatgggtaacagaaatgtcaagcccattcttgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtgggtcagaaatggtggcggcattatgggtaacagaaatgtcaagcccattcttgcat 449
Query: 421 ttgagggagcttctgaaggagcttggttacagggataccctccttaatttcactgctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttgagggagcttctgaaggagcttggttacagggataccctccttaatttcactgctgat 509
Query: 481 atactatttgctgcaatatttacatttgctcggatgatggctggaccttgtctcacttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atactatttgctgcaatatttacatttgctcggatgatggctggaccttgtctcacttat 569
Query: 541 gtaactttatctgccaacaacccatttctcataaaggctatgggattgggtttgcagctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtaactttatctgccaacaacccatttctcataaaggctatgggattgggtttgcagctg 629
Query: 601 gtaagcactttctgtttcttcaaaattgtgagaataatgaaacacaaattaaccaagaga 660
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtaagcactttctggttcttcaaaattgtgagaataatgaaacacaaattaaccaagaga 689
Query: 661 tcaacaatgacaaatggcatcaagcacgccgacacaaggaggaagatgtctaactcacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcaacaatgacaaatggcatcaagcacgccgacacaaggaggaagatgtctaactcacag 749
Query: 721 tttcagcatagctagaga 738
||||||||||||||||||
Sbjct: 750 tttcagcatagctagaga 767
>gnl|LJGI|TC69246 similar to UniRef100_A7NT67 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 739
Score = 1174 bits (592), Expect = 0.0
Identities = 602/604 (99%), Gaps = 1/604 (0%)
Strand = Plus / Plus
Query: 1 atggaagactacattacaaagatcatagttgttggggttgtttcatggacaacagccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggaagactacattacaaagatcatagttgttggggttgtttcatggacaacagccttt 196
Query: 61 gtcctagtaagaagaatctttcccaaacgcacctttgatttctccaaccgcattgtctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtcctagtaagaagaatctttcccaaacgcacctttgatttctccaaccgcattgtctct 256
Query: 121 acaatccatgcaactttagcagtaacattggcttccctttctgtcgaagattggaagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acaatccatgcaactttagcagtaacattggcttccctttctgtcgaagattggaagtgt 316
Query: 181 ccaatttgtcctgtggcctcaaaatcttcccatccaaagatgcaagttctggcagtgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccaatttgtcctgtggcctcaaaatcttcccatccaaagatgcaagttctggcagtgagc 376
Query: 241 ctttcttacctcatttatgatttagtgtgttgtctctttgatggaagagtcaatatggac 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 377 ctttcttacctcatttatgatttagtgtgttgtctctttgatggaagagccaatatggac 436
Query: 301 aacaccatccaccatttggtgagcattgttggaattggagcaggtctttattatcaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacaccatccaccatttggtgagcattgttggaattggagcaggtctttattatcaaaag 496
Query: 361 tgtgggtcagaaatggtggcggcattatgggtaacagaaatgtcaagcccattcttgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtgggtcagaaatggtggcggcattatgggtaacagaaatgtcaagcccattcttgcat 556
Query: 421 ttgagggagcttctgaaggagcttggttacagggataccctccttaatttcactgctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttgagggagcttctgaaggagcttggttacagggataccctccttaatttcactgctgat 616
Query: 481 atactatttgctgcaatatttacatttgctcggatgatggctggaccttgtctcacttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atactatttgctgcaatatttacatttgctcggatgatggctggaccttgtctcacttat 676
Query: 541 gtaactttatctgccaacaacccatttctcataaaggctatgggattgggtttgcagctg 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 677 gtaactttatctgccaacaacccatttctcataaa-gctatgggattgggtttgcagctg 735
Query: 601 gtaa 604
||||
Sbjct: 736 gtaa 739