Miyakogusa Predicted Gene

Lj5g3v0110950.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0110950.1 tr|A2Q3R6|A2Q3R6_MEDTR Poly(ADP-ribose)
polymerase, catalytic region OS=Medicago truncatula
GN=MTR_7,58.57,6e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PARP_CATALYTIC,Poly(ADP-ribose) polymeras,CUFF.52590.1
         (417 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64658 weakly similar to UniRef100_A7PC37 Cluster: Chr...    96   2e-19

>gnl|LJGI|TC64658 weakly similar to UniRef100_A7PC37 Cluster: Chromosome chr2
           scaffold_11, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (40%)
          Length = 1685

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                       
Query: 73  tatgataatggggtggatgacatccaatgcccaagatactatacaatatggaatatgaat 132
           ||||||| |||||||||||||||  || | || |||||||||| | | ||||| ||||||
Sbjct: 669 tatgatagtggggtggatgacattgaaagtccgagatactatatagtgtggaacatgaat 728

                                                           
Query: 133 ataaacactcacatctatccagaatttgttattagtttcaaggtttct 180
            | ||||| ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 729 gtgaacacccacatctatccagaattcgttgttagtttcaaggtttct 776



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 341 tccgagatctccttggctgcctttttctatgcttgttgctgctatta 387
           ||||||||| |||||| |||||||| |||||||| ||||||||||||
Sbjct: 926 tccgagatccccttggatgccttttcctatgctttttgctgctatta 972